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GT22718

CSHL Arabidopsis genetrap mutant lines

Original: GT22718

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22718

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17506024 [Map]; Strand: c
      • AT3G47500.1 - [+] show detail - cycling DOF factor 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT22718 - 5-prime edge 
    CTCTCTCTCG ACAAGGATCT TCTAAATCCC TAAATTTCAC CAATTCACAC 
    TCTCCCAAAT CTCTCTTCTT TAAATACAAC AAAAAAAAAA TCCCAAAAAC 
    TTAAAGAGAA AAAAAAACAA AAACCCCAAA AAAAGGAGGA GGGAAACAAA 
    AAACCCGGCT ATAAAGCTTT TCGGAAGGAA AATCCCTTTT CCGCCGGTTT 
    TTGAATCGGC GGTTACGGGG GAGGAGGACA AAAAAAATGA CGGGAGCGGC 
    GAAAATGACA AATCCCCAAA AAAGGAACGG ATGGATAAAA AGAAATTTGG 
    GCCGGAAAAT GGAAATGGCC CAAAATATAA AAATGATAAA ATAAGTTTGG 
    AACAAGAAAT TAACTTAACA AGTAACTTCT TCAGCCCCGG TTTGGCCGGT 
    TTGGAATCTA CAATTTGGGT TATGGAGTTA CAGGAACAAA ATTAAAACAA 
    AGTTCCGGCC TGGGGTAACC ATTAAA

AT3G47500.1

Model type
Protein coding
Short Description
cycling DOF factor 3
Curator Summary
Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.
Computational Description
cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR