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GT22746

CSHL Arabidopsis genetrap mutant lines

Original: GT22746

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22746

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1001611 [Map]; Strand: w
      • AT1G03920.1 - [+] show detail - Protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22746 - 5-prime edge 
    TCTCCGGAAG CACTTACGGG CGGTGGCGTG ACAGAAACCA CCGTCCCCGA 
    CGGAGGAAAT GATACAGAAA CGGCAACGAA ACTTCCACCA CTAGGCGGTG 
    ACGGAGAAGC ACTCTCAAAT TCAACAAAAC AGAAAGTTGC TGCAGCCAAA 
    CAGTACATTG AGAATCATTA TAAGGAACAG ATGAAGAACC TCAACGAGAG 
    GAAAGAGAGG TACAAATATT TTAGATATAT TCTTGATGGG TTTATTTATT 
    TAGTTATTTA AATTTGGCAG ACGAACAACG TTAGAGAAGA AGCTAGCGGA 
    TGCAGATGTA TGTGAAGAAG ACCAAACCAA TCTTATGAAG TTTCTTGAGA 
    AGAAAGAAAC AGAGTACATG AGACTCCAAA GGCATAAAAT GGGTGCTGAT 
    GACTTCGAAC TCTTAACTAT GATCGGTAAA GGTGCTTTTG GAGAGGTTCG 
    AGTTGTTAGA GAGATCAACA CAGGTCATGT TTTTGCTATG AAGAAACTCA 
    AGAAATCAGA AATGCTTCGC AGAGGCCAGG TTACATAATG TGACCCACAT 
    TGCATTTTCG GTTTTACGAA TTTTTTTTTT TTTTTTTAAA ATTTTTTTTT 
    GGGGGGGAAC TTGGAAAAAA AAAAAAAAAT TTTTTGGAAA AAAAAAAAAA 
    AAATTTTTAA GGAAATTTTT

AT1G03920.1

Model type
Protein coding
Short Description
Protein kinase family protein
Computational Description
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT2G20470.1); Has 109567 Blast hits to 108299 proteins in 4009 species: Archae - 130; Bacteria - 13646; Metazoa - 38992; Fungi - 11695; Plants - 26009; Viruses - 442; Other Eukaryotes - 18653 (source: NCBI BLink).
Link
InterPro Scan - TAIR