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GT22790

CSHL Arabidopsis genetrap mutant lines

Original: GT22790

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22790

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 348143 [Map]; Strand: w
      • AT1G02010.1 - [+] show detail - secretory 1A
        Distance: 0; Region: intron1 (CDS)
      • AT1G02010.2 - [+] show detail - secretory 1A
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22790 - 5-prime edge 
    CTCTCACGGA GGAGGAGGAG GAGATTACAA GTTCTTTCGT CAGATCAGCC 
    GCGATCGTAA TCTCCATCTT AATTTCTGTA TTTTGATATT TGGTTGTTGT 
    TTGTGAAAAA AAGGCTAAAG GGGGATTTGG GTGGTTTCAG GATTGCTCCA 
    CGAGATGCTT GGATCTACCA AAACCGGGGA TTCTAAAGCT TGGAAGGTCT 
    CTCTTTCTCT CTGTTTCATC TCTCTCGA

AT1G02010.1

Model type
Protein coding
Short Description
secretory 1A
Curator Summary
member of KEULE Gene Family
Computational Description
secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 1717 Blast hits to 1698 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 477; Plants - 219; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02010.2

Model type
Protein coding
Short Description
secretory 1A
Curator Summary
member of KEULE Gene Family
Computational Description
secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1).
Link
InterPro Scan - TAIR