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GT22791

CSHL Arabidopsis genetrap mutant lines

Original: GT22791

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22791

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3566592 [Map]; Strand: w
      • AT3G11385.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22791 - 5-prime edge 
    AGTGGAAGAG AATAAATTAG CAGAAACATA CATTGATCAT AACCAAAGGA 
    TCAAAAAGAT GCCGAAAGAA AAAGTACCTC CACTTCCCCC ACTTTTTGGA 
    TTTGGACGAT ACCGTAACCG GTACGGCAAA AAGATGGACA AAGAAGAAGA 
    AGAAGAAGAT GAAATGGGTC CACCTCAGCC ACCTCCTCCA CCTCCCCCAC 
    CTCCACCTCT TGGATTCAAA GGATGCCGTA ACAAATGCAG CGCAAAGATG 
    ATCAAAGAAA AAGTATTTCC ACCTCCTAGG ACTCTTGGAT TTAAAGGATG 
    TCGTAGCCAA TGCAGCGCAA ATATGGACCA AGAAGAAGTG TCTCAAGTTC 
    CTTCATCTCC CTCGACTATT GCATGTAGAC GATATCATAA CCAAAACGGC 
    AACAAGATGG ACAAAGAAAA ATTACCTTCT TCACCTCCTT CATCTCACTC 
    GA

AT3G11385.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR