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Mutant Lines
GT22810

GT22810

CSHL Arabidopsis genetrap mutant lines

Original: GT22810

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22810

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19595466 [Map]; Strand: w
- AT2G47840.1 - [+] show detail - Uncharacterised conserved protein ycf60
  Distance: -465; Region: promoter
- AT2G47850.3 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -174; Region: promoter
- AT2G47850.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -207; Region: promoter
- AT2G47850.2 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -207; Region: promoter

CTATCCCCGC CCAAGGACCT TACCGTCATT TTAGGTTGGA AACTAGTAAA 
AATTAGTTTA TTTATTTTTT GTTTGTTGTT TTGTCAAGTA GTATATTTCT 
TGGAAATATC TTCCCTTTTC TGGGATGCTT TTACTTGGCG ACCCAAGGAC 
CAAGAGAGAA CCAAAAATAA ATCTCACAAA ACAAATTAAT ACAAACTACT 
ACTATATACT ATTATTATTT AAAAAAGTAT ATGAGAAAAA GAAATTGAAA 
GCTAAAAAAA GAAACAGTAG TGCAGAGGGC AGACCGTACG GTATTCCTGA 
AGAGCGAAAG AAGAGAGAGA GAGAGAGACC GACCAAAGAA GAAGCTCCTC 
TCAATCACTG TCGAAGCATC TCTTCTTCTT CTTCTTCTTT TTTTCTTCTC 
ACTCGACAAA AAAATTTTAA CGTGAAAGAT ATTTTCAAAG CCTTTCAACA 
TAATTTGATC AAGACACTCA ATCATGCTTT TATTCATCTC TCTCGA

AT2G47840.1

Model type: Protein coding
Short Description: Uncharacterised conserved protein ycf60
Computational Description: Uncharacterised conserved protein ycf60; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55710.1); Has 358 Blast hits to 358 proteins in 92 species: Archae - 0; Bacteria - 125; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47850.1

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47850.2

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1403 Blast hits to 803 proteins in 136 species: Archae - 0; Bacteria - 13; Metazoa - 242; Fungi - 122; Plants - 888; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47850.3

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link: InterPro Scan - TAIR