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GT22825

CSHL Arabidopsis genetrap mutant lines

Original: GT22825

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22825

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4221202 [Map]; Strand: w
      • AT3G13120.1 - [+] show detail - Ribosomal protein S10p/S20e family protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G13120.2 - [+] show detail - Ribosomal protein S10p/S20e family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22825 - 5-prime edge
    TGGATGAAGA GCTCGGAACC TGAATCACAC AGACACAAAG ACTATTATTA 
    ACAGAATTAA CATCAAAGTG CTAAATGATT CTGCAAAACA ATGTCTTTCC
    CCCCCCCAAA TTTCGCATTA GCTCTGCAAA CAATCGAATC CGAGACTGAC
    CGAGGAAAGA GTGTACCTCA GAGGCGGGTT CATCGAGAAT TTCTGGAGTT
    GGATCTAGGG TATCGGGAAC AGCGAAGACC TTCGTAAGCG AGACGGATGG
    TTTCGTAAGG ACGCAGGAAC TAAGGCCGCC ATGGGTAGAA GATGAAGGCA
    GCAGAGAGAC TTTGAGTCTG GTAGAAGAAG GCGAAGAGCT TGGAATGCCG
    AAAGATGGCA ATAGAAACGA CGATACAGTA GAAACCGCCA TTGAATTTTC
    CCAAAACCAC GAATCGATTT CTCTTATTCT TCTTCCTCTT AACGTTCGAA
    GGATGAGGTT TCTTCTTCAG CAGCTTCT

AT3G13120.1

Model type
Protein coding
Short Description
Ribosomal protein S10p/S20e family protein
Computational Description
Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848); Has 8443 Blast hits to 8443 proteins in 2902 species: Archae - 264; Bacteria - 5393; Metazoa - 337; Fungi - 182; Plants - 190; Viruses - 0; Other Eukaryotes - 2077 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G13120.2

Model type
Protein coding
Short Description
Ribosomal protein S10p/S20e family protein
Computational Description
Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848).
Link
InterPro Scan - TAIR