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GT22847

CSHL Arabidopsis genetrap mutant lines

Original: GT22847

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22847

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3353489 [Map]; Strand: c
      • AT3G10710.1 - [+] show detail - root hair specific 12
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22847 - 5-prime edge 
    TCTGCAGAAA CAGAGCATGT CAAAAACCGA TTTCTCTGGG TTATAAGTAA 
    TGATATTATG TTCGGTTTTC TAGTTGATAT TATTTCAGAA TAACGTTACC 
    AATCATAATT CTAAACATTA TATCTTTGAT TTATGAGATT ATTTAGTCTA 
    CTTTGATATT ATTAGGCCAT AATTAAATTA ATGAAACAAC CAAGTCGTGC 
    TATTTCGAAA TCCTCTGTTT CCAAAAGTAA ACAAGAAGAA AAACAAAAAC 
    AGAGAGAGGT TTACCGAATG TGGCGGTCTT AAAAGTGGGA GTTCCATCGA 
    TGACATTAAG TCTACCAGAG ACAATACTCT TGCTCTCGCC ATCTCCAACC 
    ACAATAACAT TCCACATCTT CTTCTCCACC TTCAAATTCT CAAAATAAAC 
    TCCTTTCTTC ACATATATAA TCGTCTTCTT CTCACTCGAC TATGGCACAT 
    CTTGTAAAGC CCTCTTTATC GTTCTATACT TCCCTGAACC ATCCTTCGCC 
    ACCACAATAT CCGCCACTTT CCTCAAATCC GTGCTCTGCA ACAATCTCCG 
    ACCCGCGTGG AAGTCCACCT CCACGTCTGC AGTTGTTAAC AAACGCCTCC 
    GGAGTTTGAA AGAGTCAGCG ATCTTCCCGA GCCATGTGAT GATCGCTAGT 
    GCGTTACTCG TCAACTCCGT TGAGTTCTTG AGATGACTTT CGCCGAACGG 
    CCTCATATCT GGAGCCAACG TTTCCACGCA CGTCCGTTGA TACGTCCCGG 
    CTGAACTCAA CCATGTACGG AGATCATCGA CTAACTCAGG AACCGTGACA 
    TCACCGTTTG ATGATGAGGT TAACGTGTT

AT3G10710.1

Model type
Protein coding
Short Description
root hair specific 12
Computational Description
root hair specific 12 (RHS12); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: root hair, flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04960.1); Has 2830 Blast hits to 2766 proteins in 319 species: Archae - 6; Bacteria - 575; Metazoa - 1; Fungi - 191; Plants - 2032; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR