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GT22983

CSHL Arabidopsis genetrap mutant lines

Original: GT22983

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22983

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17207002 [Map]; Strand: w
      • AT2G41260.2 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: exon2 (CDS)
      • AT2G41260.1 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: intron2 (CDS)
    2. Chromosome: 2; Position: 17207167 [Map]; Strand: w
      • AT2G41260.2 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: exon2 (CDS)
      • AT2G41260.1 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT22983 - 5-prime edge 
    GTGCAGGAGT CAAGCCGAGG CCAGCGAGGT TGTGGAAACT GTTGAGCCCA 
    ACGATGTTGA GCCTCAACAG GGTGGCCGTG GTGGTGGCGG TGGTGGTGGC 
    GGAGGCCGTG GTGTATGTAT GAGGAGATGT GTCAAAATAA AGCAAAAATA 
    ATACCTAAGA AGGTACCTAG AGGTCAATAA AAAAAAACGT AGGTTCATAT 
    AATATGTATT TTGTTATGTA GTGTTTCTTC TCACTCGA

AT2G41260.1

Model type
Protein coding
Short Description
glycine-rich protein / late embryogenesis abundant protein (M17)
Curator Summary
Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
Computational Description
M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 3422 Blast hits to 2401 proteins in 322 species: Archae - 2; Bacteria - 405; Metazoa - 1403; Fungi - 273; Plants - 1003; Viruses - 37; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41260.2

Model type
Protein coding
Short Description
glycine-rich protein / late embryogenesis abundant protein (M17)
Curator Summary
Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
Computational Description
M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR