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GT23015

CSHL Arabidopsis genetrap mutant lines

Original: GT23015

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23015

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 648244 [Map]; Strand: w
      • AT4G01515.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT23015 - 5-prime edge 
    TGACATTGCT GTCCACAGAA CACAAGATGT CTGCATTCCC CTGTTCCAAA 
    GAAGCATGCG ATCTCCCGTG GTGAGCTTGC CGTGAACCTC TAGCCATGTA 
    CAGAACGAGT ATTTAGGATT TGAATGGGTA AACCATATTC CTTTGTACCA 
    AGAAACCTTG CTCGACCCTG AACGAAGCTG CTTCCATATA TCTTTTGTGC 
    AGAAATTGGC TCTATAGTGA TCAGTTGATC TTTTCCACAA CACTCTGTCC 
    TCAACATCCC AACGGTTCTG TCTCTGAAAC AATAGAGCTT CTTCGATCCG 
    ATTAAGGCTC TCCAATCTGT GTCGTCTTCT CGCTCGTCCA GTCCAAGCCT 
    CAGCCACTGT TGATTGCCTT CTCATACCAG AAAGAGGTGC GGTGTCCGTT 
    TCTCACTTCC ACTTTACAAA ACTCCTTTGC GACATCTCTG TATTTAATAA 
    GCTTTGACCA CATCCAAGAG CCCCTATTAG TTGTGGCTTT AACGGACCAG 
    AAGGTATCAG CTTTGAGTAG ATATTTTTCT ATCCATTGAA CCCATAGAGA 
    GTTTGCATGA GACACAAGTC TCCAGATTAG TTTTAGGCAG CAGACATCAT 
    TTATTTATTT CAAGGGCCGA AGACCAAGTC CTCCTTCCTG CTTCGGTTTA 
    CAGACATCAA CCCAACTG

AT4G01515.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-18 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)
Link
InterPro Scan - TAIR