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GT23024

CSHL Arabidopsis genetrap mutant lines

Original: GT23024

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23024

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4122227 [Map]; Strand: c
      • AT3G12920.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT23024 - 5-prime edge 
    GTGTAGGGTA GGGATGAGTA TGTGTAGAAG CTGTGGGAAA GGAGAAGCAA 
    GTGTGTTACT GTTACCGTGC AGACACATGT GTCTATGTTC TGTGTGTGGC 
    TCTTCACTCA ACACTTGTCC TATATGTAAA TCTCCAAAGA CCGCTAGTCT 
    ACATGTTAAT CTTTCCTCTT AGACCTAACC AATACCAGTA AAATGTAAAT 
    GCCCCCAAAA AAAGTAAATA GTAGACAAAA GTTTCTTGGT TAAAAACTGT 
    TCATTCTTTT TTTCTTTGGA TGGTGATGAT GATGATGGAA CACGAATCTT 
    TGACATATGT GTCAGATCTT TAAATTTCGT AAGGGGTTCA CGAGGGACCT 
    CTGTTGCTAA AAATCGTGGG TTAGGTTTAT ACCCACTTTC AATGTCATTT 
    CCCATCTTTG TATGAATTTT CACCAAAAAA AGTGGAAAAG TTTTGTGTGG 
    TTCAACTACT AGTCTTTTAA CATAGTAGTA GTAGGGGTAT AACGTCGCTT 
    TTCACAAGCT TGAATTTTTC TTTAACATAT ACTTTTGCCC AATCGTTTTT 
    TTTTTTTTTG GTTTTTTTCA AAAAAGGAAA TTTTCAATAA AAAAAAA

AT3G12920.1

Model type
Protein coding
Short Description
SBP (S-ribonuclease binding protein) family protein
Computational Description
SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink).
Link
InterPro Scan - TAIR