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GT23097

CSHL Arabidopsis genetrap mutant lines

Original: GT23097

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23097

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16648709 [Map]; Strand: c
      • AT2G39880.1 - [+] show detail - myb domain protein 25
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23097 - 5-prime edge 
    TGCTTTTCAC ATGTTTGTAT AATGTTTTTA TGAAAATGAT TTGAAATGCA 
    GATGAGGAGG AGCATATGAT AATGTCTGCA CAGGCGGTTC TTGGGAACAA 
    ATGGTCTGTG ATTGCTAAAC TCTTACCTGG GAGAACAGAT AATGCCATTA 
    AGAATCATTG GAACTCTAAT CTTAGACGTA AACCAGCAGA ACAATGGAAG 
    ATTCCTCTAT TGATGTCTAA TACAGAGATA GTATATCAAA TGTATCCATC 
    AATGGTCAGA AGGATATCAA ACGCATCCCC CAAAAAAACA TCTACCTCAA 
    GAAGAAGAAA CCGGTGTATT AAGTGATGAT AAAATGGATG ATGAAGCAAA 
    G

AT2G39880.1

Model type
Protein coding
Short Description
myb domain protein 25
Curator Summary
Encodes a putative transcription factor (MYB25).
Computational Description
myb domain protein 25 (MYB25); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8881 Blast hits to 7992 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 531; Plants - 5628; Viruses - 6; Other Eukaryotes - 1882 (source: NCBI BLink).
Link
InterPro Scan - TAIR