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GT23157

CSHL Arabidopsis genetrap mutant lines

Original: GT23157

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23157

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 337784 [Map]; Strand: c
      • AT3G02010.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -181; Region: promoter
    Flanking Genome Sequence: GT23157 - 5-prime edge 
    GTACTAATGG GCGAAAGAAC AATTGGGGAC AATGTTCCCC TTTTTTAGTG 
    CTCGAACAGA AATTACAAAT ACAACTAAAA AACCAAACAA AAAAATCAGA 
    GTACATAAGC CCAAAGGGTG CAATTAACTA AAAGCCCATA AAACAGTCGC 
    CTAATAAGCC CATCAAACAA TCATCACTCA AAAAGCTTAC AAAACAATCA 
    TCACCTAAAA AGCCCAAAAT ATTGATACGT TATTTTCCCA CGCCACGCGT 
    CGATCAAAGT TTCTGTTTGA CCCAATAAAA ATAAAAACCA TGGGTAAATT 
    ACTACTCTAC AATGAATATT TTGTATTTTG AAATTAGCAA AAAATATAAA 
    TAACGAACCT AGTGAAATCG ATAAACAACC AAACAAAACA GACAATATCG 
    TGATGTGATA TAACTTTTGA CGCAATATCT ATGCAGCATA ACAAAAATAC 
    TAGTAATACG TTTCAAATTC CAAAGAATGA AGAAGAAACA GAAGAAAGCA 
    GCCGTTGACT GTTGTTTGAA AGTGAAAGA

AT3G02010.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 47268 Blast hits to 13605 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 106; Plants - 46551; Viruses - 0; Other Eukaryotes - 545 (source: NCBI BLink).
Link
InterPro Scan - TAIR