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GT23163

CSHL Arabidopsis genetrap mutant lines

Original: GT23163

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23163

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 375108 [Map]; Strand: c
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23163 - 5-prime edge 
    AAGTCTTTAC CCTTGTCGCC GTTATCACCA AAATCAAAGG AAGAGCCTCA 
    ATCGCAGCCA ATGACACCAC TGATGTCAAA ACATGTCAAA ACAAATCGAA 
    ATCTACTTAT CCAATCACCA CCTAAGTCGC CGCCAGTATC CACTAAATCT 
    CAGCAGCAAT TTCTAGCATC AGTGCCTCTT CGACCGCTAA CAACAGAACC 
    AAAAACACCA TTGTCCCCCT CTCCAACGCT AAAGGCTACC AAAGAATCTC 
    AGTCCCAACC GTCTCCACCG CTTGAATCTA TCGTTGAAAC TTGGTTCCGA 
    CCATCGCCTC CAACATTAAC AGAAACTGGT GATGAAACTC AACTACCTAT 
    ACCACCACCA CAAGAAGCCA AAACTCCACC GTCTTCGCCG TCAATGATGT 
    TAAACGCTAC TGAAGAATTC GAGTCCCAAC CGAAACCACC GCTTTTGCCG 
    TCTAAATCCA TAGACGAAAC TCGGCTCCGA TCACCGCTTA TGTCGCAAGC 
    ATCGTCTCCA CCTCCTTTGC CGTCTAAATC CATTGATGAA AATGAAACAA 
    GGTCCCAATC ACCGCCGATT TCGCCACCAA AATCTGATAA ACAAGCAAGA 
    TCTCAGACAC ACTCATCACC ATCACCACCG CCACTGTTGT CGCCGAAAGC 
    TAGTGAAAAC CACCAATCTA AATCACCTAT GCCACCACCA TCTCCG

AT4G00890.1

Model type
Protein coding
Short Description
proline-rich family protein
Curator Summary
Encodes a putative glycosyl hydrolase family 10 protein (xylanase).
Computational Description
proline-rich family protein; Has 74402 Blast hits to 44432 proteins in 1604 species: Archae - 100; Bacteria - 7075; Metazoa - 32308; Fungi - 16616; Plants - 5983; Viruses - 2030; Other Eukaryotes - 10290 (source: NCBI BLink).
Link
InterPro Scan - TAIR