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GT23222

CSHL Arabidopsis genetrap mutant lines

Original: GT23222

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23222

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3370317 [Map]; Strand: c
      • AT3G10760.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23222 - 5-prime edge 
    AGAAAGTGAG CAGGAACAGG AGAGCTAGCG AAAAGACGAT CAGTAGCTGG 
    ATCTGAACCA GCACCACCAC CAGAAGACAA ACCTTGCATT CTCTTAAGAT 
    AAAGTCTATA CTTTTGCAAA TGACTCGCAA CGTTTTCTCT AGTTAAACCA 
    TCAACACTCA TAAGCTGCAT AATCGTTTTA GGAACTGCGT TCTTAGTCCC 
    TAAATGCGCA ACAGCATCAA CGAAACGTTT ATGCAGCTGC GGTGTCCAGA 
    CAAGACGAGG TCGTTTTAAA GTCCGAGCTG GTTCGTCTCC GGCAGCTCCT 
    CCGGAGCCTA GATCTGCTGA ATCTGCAGCG AATTCGGCTG AGGAATTGGC 
    TTGAGAAGAT GGAAGCTGAA GCTGAGACGG TGTAGGAGGT GTGGTTTGGT 
    GATGATGATG ATGATGAGGT TGGTTTGAGT TTCCGTTTCC GTGATTTGGG 
    GTTCATCTCA CTCGA

AT3G10760.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR