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Mutant Lines
GT23249

GT23249

CSHL Arabidopsis genetrap mutant lines

Original: GT23249

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23249

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1167175 [Map]; Strand: w
- AT1G04350.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 407; Region: intergenic
- AT1G04360.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 282; Region: intergenic

GGCGAGTCTG CGGCGACAAA GATTTATTTA GGGCCTTTAT GCTTTTATGC 
ATTTGGGCCT TTATGTGTTT AAGCCGTTTG GGCCTCACAG GTTAGTTCTT 
TGTTTCCTTT TTTTTTTTCC CCGGCATTCT TTGGGGGGAA TTGTTTTCCT 
CCCCCCCCAA AAAAAAAAAA CCCAATTTTT TCAATTTTCA AAAAATTCGG 
GAAAAAAAAT AAAAAAAACC ACCCCACCCC TTTAAATGGA AAAACTTAAA 
AAAGGGAATT TGAAAAAAAA AAAAATGGCA CCCAAAAAAC CTTTCCCCCC 
AAATTCCCCT CCCAAAAAAT TTTTTTTAAA ATCCCCCCCA AAAAAAAAAA 
AAAAAAAAAA AAAATTTTTT TGAAACGGGA ACCAAAAAAA AAAAAAAACC 
AAATTGGGGT CCCAAAAAAA ACGGAAAAAT TAAAAAATTT TTAAAATTCT 
CAACACTCCC AAAAAAAAAA AAAAGACCTT CTCGGCCCCT GGAAAAAACC 
CCACCCCAAG GGGGAAAAAT TCACCCGCCC CCCGGAACAG AAACCGGCCG 
GTTTTCCCCG GAAAATCCCC CCGAAACCGC CAAAAAACGC TAAAAAACCA 
GGAAAAAACC CCC

AT1G04350.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary: encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59540.1); Has 8112 Blast hits to 8080 proteins in 977 species: Archae - 0; Bacteria - 1066; Metazoa - 116; Fungi - 819; Plants - 4883; Viruses - 0; Other Eukaryotes - 1228 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04360.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink).
Link: InterPro Scan - TAIR