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GT23259

CSHL Arabidopsis genetrap mutant lines

Original: GT23259

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23259

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17579041 [Map]; Strand: w
      • AT4G37390.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: -616; Region: promoter
    Flanking Genome Sequence: GT23259 - 5-prime edge 
    TTGATTGAAC TAATTATCTT TATTGTATTA GGTAGGCTTG TATCCGACAG 
    TCAACTTAAA CTTCATAGTT GAAACCAATA AAACCTGAAG AGAATTAAAT 
    TATATACTAA TCATAATCAG CATGATGTTT TACTATTTGA TATCTAACTT 
    TCTTCTTTAT GATAGAGAAA TAGTATTCGC AATAAATCAC ATATAAAAAA 
    AATTACTTTA CGTCATAGAT TATCAACTTG CCTCCAAACA CAACAACATG 
    ATCCCCTACG CTACAATACA TAAAATGAAA AATAAATTAA TCGTTGATTA 
    ACTTAAAGTC ACTCCGTTAA TAACGTTATA ACCCAAGCTT ATTAGTTTTT 
    TTGACCGTCT TTATCGACGA C

AT4G37390.1

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.
Computational Description
BRU6; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G59500.1); Has 1707 Blast hits to 1543 proteins in 239 species: Archae - 1; Bacteria - 597; Metazoa - 55; Fungi - 2; Plants - 674; Viruses - 0; Other Eukaryotes - 378 (source: NCBI BLink).
Link
InterPro Scan - TAIR