1. Home
  2. Mutant Lines
  3. GT23310

GT23310

CSHL Arabidopsis genetrap mutant lines

Original: GT23310

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23310

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1829605 [Map]; Strand: w
      • AT1G06040.1 - [+] show detail - B-box zinc finger family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G06040.2 - [+] show detail - B-box zinc finger family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23310 - 5-prime edge 
    GTGCTTGCTA GCGAGTTTGT TAGCGGCGTG AATCTCGATG TCGCATTGAG 
    GACAGAGAGC AGCTTCGTCG GCGCAACAAA TCACCGTCGC CGGAGCTTTC 
    TCACACACAT CACACTGTAT CTTCATCACC GGATACAAGA AACCAAAATA 
    TCTAGGTTTC TCAAGAAGGA AACAGAATGC TTAAAATGAA GGGTTTATTG 
    CTAGTCTGGC TTCTCTTAGA ATAGCTTAGC AGAAGCGTAG GTTCAGAGAA 
    AGAGCTTAGA GAAGATGAAA GAACAAAGAG GGAGAGAGTG TTTTGTGGGG 
    AACAAGTAGG TGGGATGAGC AATTGGTTGT GAGTGAAAGA GAGAAGATAA 
    GGATTTGATG AATCTTGCTT GTTGCTTTGT TTTCATTATT CTGCGTATCA 
    AAAGGAAACA CTCTGCTTCT TACAGCAAGG TCTTGCGGGT CCCACTCTTT 
    TTCTGTGGCT CTCCTTCATC TCACTCGACT

AT1G06040.1

Model type
Protein coding
Short Description
B-box zinc finger family protein
Curator Summary
Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.
Computational Description
SALT TOLERANCE (STO); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homologue (TAIR:AT2G31380.1); Has 1912 Blast hits to 1325 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1809; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06040.2

Model type
Protein coding
Short Description
B-box zinc finger family protein
Curator Summary
Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.
Computational Description
SALT TOLERANCE (STO); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homologue (TAIR:AT2G31380.1); Has 1915 Blast hits to 1323 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 1814; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR