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GT23336

CSHL Arabidopsis genetrap mutant lines

Original: GT23336

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23336

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 78150 [Map]; Strand: c
      • AT2G01080.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23336 - 5-prime edge 
    CGATGAGCAC CACCGCCAGT ACCAGCAGCG CCAGGAACGC GAACAGCAAG 
    AACAAGCAGC AGCAGCATCC CTTCAGCGAC GCCGACGACG ACGATGAGTA 
    GCTCCGGTAA TACGGCTGCT GGTTCTGAGC AGCAATCGGA TCGCCGTTGA 
    GACCTGCTCT AGAACTAGAA GGAGGAGGAG GCATAGTAAG TGAAAGCAGG 
    AAGCTCCCTC TCCCTTTTCA CTCTTCTTCT GTAATAGCGG TGTTGAAATT 
    ATACACAACA AGAGAGAGAG ACCCTGTTTC CGTGTCTGGA CTCTAGTATT 
    ATTGACAAAT TAATGTTTCA CAATTTTAAC CACCAATAAA AATATCAATA 
    ATGTAATTTA CAGCAATTTT AGGCAAATCT CACACTCAGA CAAGGGTTAG 
    AGATGACTCA AAAAATGTTG GATCTGATAT TAAAAAAACA AACAAATACA 
    AACACACAGT TACTATCCTT TAGTTACATC ATATAAATGT ATTACGTCGT 
    TGCTTTGTGC TATATAGCTG ACCTCTTGCT GATATTTATA TTTTCGTCAA 
    CTCTTGATCA AACACAGATG CCACGTCGTT TCTATACTGA CTCTCCTCAC 
    TCTCTTTTAT CTTCTTCAAC ATCTTCATCT CACTCGACCA CCGCATTCTT 
    CTCTTGCTTA ACTAAGCTAA TATCACCATC TTGCTTCCCC CCTGTCAGAG 
    ATTGAGCTTC CTCGTTTTC

AT2G01080.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR