1. Home
  2. Mutant Lines
  3. GT23388

GT23388

CSHL Arabidopsis genetrap mutant lines

Original: GT23388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23388

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18065618 [Map]; Strand: c
      • AT4G38650.1 - [+] show detail - Glycosyl hydrolase family 10 protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT23388 - 5-prime edge 
    CTTTTTCTCC CTGATACTCT CCCAAAAGCC GAAGAAGCTA AAGGAACCAT 
    GGTCATCTGT CGTCGCCTTA ACTTCACCAG TCTTCCATTC TAGAAGCTTC 
    TGATCCACCA CGTCTCCGGC TGGAAGGTTC CGGAATTTAT CGTCAGTGAG 
    GCACATTTGG TAACAGCCGT TTGGGTGAAG TGCGGTCCAT AGCATTATAC 
    CGTTTACCGA TGGGTGCGAG AATCCTTCAC GTAACACTTG CTCCAAATAA 
    ATCGCCTGAA AACGTAACAA ATTTCCGGTT ACTTGCACCC AAGTATAATC 
    AATGTGTACT CCAACCAGAT TTTATCATCC TAACAGACAT ACCGTATTTC 
    AGCCAAAATC AATTCGAAAA ACCGTTAATA AACCGGCTAA AAATTGTAAC 
    CAAAACCAGA TTCAAATTGC AAACTGAACT AAACCGGAAC ACAGAGACTT 
    GTGAACCTGA CAGCGGTGGT CGAGGCTGCT GCTGATATCA ATCTCGGTGA 
    GCCAGATTGG GAGCTGGATC GTATCGAGTT TATCTAGGAT GGCTCTCA

AT4G38650.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family 10 protein
Computational Description
Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G38300.1); Has 2063 Blast hits to 2053 proteins in 438 species: Archae - 10; Bacteria - 1176; Metazoa - 20; Fungi - 357; Plants - 277; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR