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GT23488

CSHL Arabidopsis genetrap mutant lines

Original: GT23488

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23488

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 256273 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23488 - 5-prime edge 
    TTTCTCCCTA AATTATGAAT AGCTTCTCTG TGTTGAATAA TTTTTTTACT 
    AAATCAATGT TTTGTCCCAA AGCCGAGGGT CCTAAGAATA TCCCAGCCTG 
    TTTCATATAT ACCAACAAAA TATCACACTT CTATAGTTTA AACCTTTTTT 
    TCTTTGCGGG AAATATAGAG AGATTCAAAA TTTATTAAAA AAAACGTAGA 
    ATGGTATGAA AAAGTGATTA CATACCAGAA TTTGAGTGAC GAAGTCGACA 
    TTTGCGAGAG GGCGGAGAAG AGCTTGGAAG ACGGAAGAGA GAGATGAGAC 
    GAGAGAAATG AGAAGAAGAA GAAGAGGAGT CGAATACTTC AATGGATCAT 
    CTCCTCTAAG TAATCCGCCA GAGCTTGATC CCAACCATGC CTCGCATACA 
    AATTCATGTG TGCCATTATT TGTAACACTA TTGTTCATCT CACTCGACCA 
    TGAGAATATT TTTTCTTCTT AAAACTAGTA TTCACGTTCT TCTTTATAAC 
    CATTTTTGTT TGTGTTTTTG AATTCAGCAA AACGCTAACT AATTGAGCAA 
    ACAGAACAAG CTTGTTGAGC TGGGGAA

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR