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GT23634

CSHL Arabidopsis genetrap mutant lines

Original: GT23634

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23634

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2983709 [Map]; Strand: w
      • AT5G09620.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT23634 - 5-prime edge
    GATTCATCAG AAATCCAGAT TCCTAGTTTG ATCTAAAAAA ACACTTTTAC 
    ACATATATCA TAAAGTTTAA AGAAATGGAT AATCATAACA TTAACCTCAA
    TGTTAACTCA ATCTCACACT CACACCGAAT CTGAAACTTG TGGTGCAGCC
    ATGTTAACCG CCACTTTCCC ATCCGGTCCG GTTCTGAGAT CGGTCATGCC
    ACTAACCGGT TGACCCATTC CCTGGTACTG CTGCTGCTGC TGCTGAGGCT
    GGGCTGGTGG CGGTTGAACC ATCATGCCTT CTCCAGCCAC CGTATAGTAC
    ACAGGCTTCC CCATCTGTGA ATAAGGTTCC TGTAACCCCA TTGGAGGACC
    GACACTAGTC ATAACTTGCG GACCAACACT AGTCATAACT TGTGGACCAC
    CTGAAAACGT TGGCTGTGGT TGAACCACGT TGTAACCCCA TTGCAGCTTG
    CTGGTAATGC TCAACCTTCC TGGGGTAGTT CATACATTGG TCAGAACTAT
    GCAAGTTTCT CCAGAGCTTT CGGGTAGGTT TGTGTTTGTT TCTTGTGCTT
    TTTATACCTA TTAGAATTAC TCTGTGGATG TCATTTCGAC TACGTGTTGT
    TTTCTTTTAT AGGTCAAAAC CTGTTGTGAA TGACATTCTT GGTACTGGTT
    TGGGCACTAA CAATGCCATT AGAGAGGAGA GAGAGGTAAA ATGACTTTGT
    CTACATTTTG TTTGATTTTT GCTTTTGTAA TGTTTAAGAG CAGCTTAACT
    T

AT5G09620.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G64430.1); Has 18668 Blast hits to 11149 proteins in 562 species: Archae - 0; Bacteria - 597; Metazoa - 7421; Fungi - 2059; Plants - 1927; Viruses - 138; Other Eukaryotes - 6526 (source: NCBI BLink).
Link
InterPro Scan - TAIR