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GT23693

CSHL Arabidopsis genetrap mutant lines

Original: GT23693

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23693

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26970021 [Map]; Strand: w
      • AT5G67630.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -627; Region: promoter
      • AT5G67640.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT23693 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTCGGAGA TGCTTGTGGG 
    AGCAATGTTG AAGAAGAAGA TTCTGACGGT GGCGAAGAAG AGGTTGATGG 
    GAGCATTAGC AACATATGCT CACAACTTGT TCGACCAAAT GCCCAAGAGA 
    AGAAAGAAGG TACACACAGC TTTTGACTTT TTTGACGATA TCCATAGTTT 
    CAAATCTTTT GGGAAAAATT CGTACTTTAT CTAACTAGAT TTCATAACAC 
    ATGTACATAT TCATATCACG CGACTAACTA TCATCTCAAT CTACTCGCTC 
    CTCACGATGA TGTCTCATTG TTGCTCCAGT GCGAATTACT CATACGTTCT 
    CTTTTGTGTA TTATTACATT ACGCGTCTGA CTCTATATTT TTTGTTTGGT 
    AGGACTAATC GGTGACAATG ATAAGACGAG AAAAGTCAAG AAGAGAAGAA 
    ATGCTAATAA ACTGGCCAAA GAGAGTTCTA ATAATATCCA GGATGGATCC 
    AATGCAATCC CTGAAATTCC TAATTAGGGT TCATCTCACT CGA

AT5G67630.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67640.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR