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GT23694

CSHL Arabidopsis genetrap mutant lines

Original: GT23694

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23694

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1688989 [Map]; Strand: w
      • AT1G05640.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23694 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACATTCATT AGTTGTTGAA 
    GAGATGTTGA AACATATGGA TCTTGATACT GCATCAGTTA AAGCTCGCAA 
    CGGTTTTGAT CCTTTCCATG TCGCTGCAAA ACAAGGCCAT ATTGGTAAAT 
    GAAACTTTAG AGAATCTGAT AATAACTTGA AGACCTTGTT ATTGTTGTAC 
    ACCTTCTTGA CATATATCTT TGAATGTGTG CTGTCTTTTG CAGAGGCATT 
    GAAGAAATTG TTGGAGACAT TTCCGAATCT GGCTATGACG GTGGATCTAT 
    CGTGTACAAC TGCATTGCAC ACGGCTGCTT CACAAGGACA CACTGATGTG 
    GTGAATCTTC TTTTAAAGAC GGATTCTCAT TTAGCTAAGA TAGCTAAGAA 
    CAATGGTAAA ACCGCACTTC ATTCTGCAGC GCGAATGGGG CACAGAGAAG 
    TGGTTAAGTC TTTGATAGGT AATGATGCAA GCATCGGGTT TAGAACTGAT 
    AAGAAGGGAC AAACAGCGCT TCACATGGCT GTCAAAGGTC AGAACGAAGG 
    GATTGTTCTT GAGTTGGTGA AACCTGATCC TGCGATTTTG AGTGTTGAGG 
    ATAGTAAAGG GAATACGCCG TTGCACACTG CCACAAACAA AGGCCGTATT 
    AAGGTATCAT CATCGCTAAT TCCCCCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1689079 [Map]; Strand: w
      • AT1G05640.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23694 - 5-prime edge 
    TGCCCATTTT CTGCTGCCTA TAAAGAGGGG TCTCTCCTTC TAGATTCTCG 
    CTTTGATGAC AACTCCTTCA ACTCTTCAAT GCCGTTACAA GCTCGAATCA 
    ATTCCATAAC CTTTCCCAAA TTCCCCGTTC GAGCTGCGAG ATGAAGAGGA 
    GAATCTCCTC TTTTACCAGG TGAGTCAGTC TTCTTCTTCA TCTCACTCGA 
    CC

AT1G05640.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 67578 Blast hits to 27690 proteins in 1106 species: Archae - 88; Bacteria - 6425; Metazoa - 32117; Fungi - 6903; Plants - 5434; Viruses - 485; Other Eukaryotes - 16126 (source: NCBI BLink).
Link
InterPro Scan - TAIR