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GT23709

CSHL Arabidopsis genetrap mutant lines

Original: GT23709

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23709

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 328425 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -610; Region: promoter
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23709 - 3-prime edge
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTCAATGA CGGTGACGAA 
    ATCCTCGCCG TCGTACCAAA CTCACTCGCC GTTGGTCTTC CATTGTTAAC
    CTCAAACGCA TATCCACCTT CCTCCATTTA TTCCCGATCT ATAAAACCCT
    TACTTCTCTA ATCTACACAG GCATCAAAAG TTCCATATCT ATTGAAGTCT
    CAAATCCATC CACCAGAAAC AAAAAAAAAA TCAACACAAA CCTAAAATCA
    CCACATTCTC AAATCAAGAA AGCAAAAGGT AAAATTAAAA CCCGCAACAC
    CACTGAATCG TCAAAAAAAA CTGATAAACC AAAATTGTTA GGGTTTGAAT
    TCGGTTTCCC CGAAAATTCT ACAAAAACAA AAAAAAAATA GCAGGTTTTT
    TTGGGTAAAA AAGGATTTAA AAAAGGTTTA GGCTAATTCA CACCGAGAAA
    AGAGAAAAAA TTACCGTTTT CAAATTTTTT TTACTTTTTC AGGTTAATTT
    AAAAAAAACC TAACAATAAA ACGCTGCCGT TAAAAACCAA AGAACGGTTT
    TCTTAACCCT TCTGGGGTTA AGCCCTTCCC CGTTAAATTA ACCTTTAAGG
    TTAAAAAATC TTTTCAAATT TGAACCCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 328517 [Map]; Strand: w
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -702; Region: promoter
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23709 - 5-prime edge
    TATGTCATCG TCTTTCCGTG AAGGAGGAGG AGGAGGTGGA AGTAAGGGTT 
    TAACACGACG GAGGTCAATG AAGCCGAGTT TTGACGCCGA TAATGAGTTC
    ATTACTTTAC TCCATGGCTC AGATCCGGTT AAAGTTGAGC TTAATAGGCT
    TGAGAACGAT GTCAGAGGTA CTCTATGATT CTCGATCTGT TTTATTCTAT
    TGGTTGATTT CAAGTTTCCG TTGACATTTT TGATTTTGTA ATTTGGTATA
    ATTAGGTTTT TGGATATATG TTTGAACTTT TCCGTACGTG CATGAATGTC
    ATTTCTTGGT TTTAAACTTT GACTTTTTGG TGCTCAGATA AAGATCGGGA
    GTTGTCTGAA TCCCAAGCTG AGATCAAAGC ATTGAGGTTG TCTGAACGGC
    AAAGAGAGAA GGCTGTTGAA GAGGTTAGTG TAATATCTGC ACTTAATCTG
    TCTTTTTCCT TACATTTCAC AATGTCCTGT AAAGGTTGTT TGGATTAGAC
    TTGATTCAAC TGAATATTTC ACATGAACAG AAGATTGAAG ATATAGCTTG
    ACGTAATGGA TTATTTGTTT GGGTCTAATC AATGGTTAGG AAGAAGTTAA
    ATTTGTGAAG CACAATTTCA ATATTTAGAT TCTGAAAAAT GTTATCCTTC
    GGCTCTAAGT TTTTGCGCAA GTTGCATTAT GTAGTATAGG TGGTTGAACT
    GAATTACTCT TGGGTTCA

AT2G01740.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.1

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1); Has 32985 Blast hits to 20590 proteins in 1788 species: Archae - 429; Bacteria - 4222; Metazoa - 17320; Fungi - 2752; Plants - 1806; Viruses - 150; Other Eukaryotes - 6306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.2

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1).
Link
InterPro Scan - TAIR