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GT23750

CSHL Arabidopsis genetrap mutant lines

Original: GT23750

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23750

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30195944 [Map]; Strand: c
      • AT1G80310.1 - [+] show detail - sulfate transmembrane transporters
        Distance: 0; Region: exon1 (CDS)
      • AT1G80320.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -838; Region: promoter
    Flanking Genome Sequence: GT23750 - 3-prime edge
    TACCGACCGT TACCGACCGT TTTCATCCCT GGCTATGCCC GTCTGTCACG 
    GTGCTGGTGG GTTAGCTGGT CAGTATCGGT TTGGGGCAAG GAGTGGATTA
    TCCGTTATTT TTCTCGGAAT CGGGAAACTG ATTGTGGGTC TGGTGTTTGG
    AAACTCCTTT GTAAGGATTC TGAGTCAGTT TCCGATTGGA ATTTTAGGGG
    TTCTGTTGCT ATTCGCGGGA ATCGAACTGG CAATGGCTTC CAAAGACATG
    AACTCCAAAG AAGATTCCTT CATCATGCTG GTCTGCGCCG CTGTGTCGAT
    GACTGGCTCG AGTGCCGCCT TAGGATTTGG TTGTGGAGTT GTTCTTTACT
    TGTTACTGAA GCTAAGAACG TTAGACTGTT CTTCAGTAAC TCTGTTTTCC
    CGGTCAAGTG ATGAGTCGCA GGTCGATTCC GAAGCCGCTC CTCGTGATGT
    CTAAGATGGA CTTGCCAAAA TGACTTGATG GAGAAGTACT TATGACGAAA
    TGGCGGGCAG CTGCGAGTGC ATCTTATGTC TTCGATTCCA TCTGCGGTCA
    TAGGGGTTGG TGCCCTGTTT CATTGAGTGT ATTGAGATGT GAAACCATTA
    ATCAATGTTT TCATTGCTCA ACTTTGTGCT TAAGATTATA ATAATCAGGT
    ATGATTAAGG ACTAATATTG ACAAACCTTT TAACTAAAGA AAATCATAAG
    GCTGACGCAT AAAAGAGCCA AAACTGGATC TCTCCCAAGT ATTGTCCTTT
    CTATAAAGAA TCGAATCCCG AATCCACTGT GAATGTACAA TTGACTTTGA
    CAACTA

AT1G80310.1

Model type
Protein coding
Short Description
sulfate transmembrane transporters
Computational Description
sulfate transmembrane transporters; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547); BEST Arabidopsis thaliana protein match is: molybdate transporter 1 (TAIR:AT2G25680.1); Has 846 Blast hits to 836 proteins in 367 species: Archae - 24; Bacteria - 581; Metazoa - 20; Fungi - 62; Plants - 71; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80320.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G15540.1); Has 5609 Blast hits to 5543 proteins in 727 species: Archae - 0; Bacteria - 610; Metazoa - 47; Fungi - 436; Plants - 3975; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink).
Link
InterPro Scan - TAIR