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GT23767

CSHL Arabidopsis genetrap mutant lines

Original: GT23767

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23767

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23169375 [Map]; Strand: c
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23767 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCTCCCT AGTTTACACA CCTGAAACCG 
    AGTCCGACGA GCTTGGTCTT GACCCGACCC GACCCATAGT CCACTCGAGC 
    GTCTACAAGT CTCTCCGAAC CAATCTCCCT AGAGAATGTA TGGGTTACAA 
    GGATTTCCCT TTCGTGCCAC GTGGCGATGA TCCGTCAAGA GACTCTAGAA 
    GGTATCCGAG TCACAGGGAA GTTCTTGCGT ACCTTCAAGA CTTTGCTACA 
    GAGTTTAACA TAGAGGAGAT GATCCGGTTC GAGACTGAGG TGCTTCGGGT 
    TGAACCGGTT AATGGTAAAT GGAGGGTCCA GTCTAAAACC GGCGGCGGTT 
    TTTCCAACGA TGAGATCTAT GACGCCGTTG TAATGTGTTG TGGACATTTC 
    GCAGAACCAA ACATCGCTCA AATTCCTGGT AAAATATCAA AATTTTCTTA 
    TACTTTATTT CAAAAAAAAC TATTGGTAAA TTTTTTTCGA AATTCGTAAT 
    AATTTTTTGT GTGTATATGT GGTTTTGACA TGTGAATAAT TGTATAGGAA 
    TTGAGTCATG GCCGGGGAGG CAAACACACA GCCATAGTTA TCGAGTTCCT 
    GATCCATTCA AAGATGAGGT ATTTTCATCT CACTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23169282 [Map]; Strand: c
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23767 - 5-prime edge 
    CCAAAGACCA CCTACTTGTT TCTCTCGGTC AAGGACAACG ACGGTGTGAC 
    CTTCACGACG AAGCTCTCTG GCTGCTACTA AACCGGCTGC TCCGGCTCCG 
    ATCACCGCCA CGTGTTGAGA ATTGATTGGA CTAGGAGCTG GTGCCATTTT 
    TCAAAGTTTT GAATGCTATG TTTGTGTTTT GTGTTTTGTT GGTAGAAATG 
    TAAGAAGGAT TGTTGTGTAA GACTCTAAGG TCTCGACGTG ATTTATATAG 
    AAAACTGAAA ACATCATTAC TCCATTTTAA TAATGAACTC CGCGTTATTT 
    AATATCTTAG CTGATTGCCC GAATACGTTA TTTTTATCCG GTTTCATCTC 
    ACTCAACAAT AATCTTCATC TCACTCGACC

AT1G62570.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 4
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 4 (FMO GS-OX4); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 12978 Blast hits to 12465 proteins in 1535 species: Archae - 27; Bacteria - 6311; Metazoa - 1188; Fungi - 1455; Plants - 842; Viruses - 0; Other Eukaryotes - 3155 (source: NCBI BLink).
Link
InterPro Scan - TAIR