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GT23769

CSHL Arabidopsis genetrap mutant lines

Original: GT23769

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23769

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1947758 [Map]; Strand: c
      • AT3G06410.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT23769 - 5-prime edge 
    CTTGATATGA TACGTTTCAA TGTATTTGAC AGGGCGTAGC GCAATGCACT 
    CACTTTGCTC AACACGGAAT CTGCAAGTTT GGACCGGCGT GTAAGTTTGA 
    TCACTCAATG AGTTCTTCGC TTAGCTACAG TCCGTCTGCA TCATCACTAA 
    CTGATATGCC CGTGGCGCCA TACCCAAGCG GATCATCCTC ACTCAGCGGC 
    TCATCAGCTC CTG

AT3G06410.1

Model type
Protein coding
Short Description
Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description
Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 3128 Blast hits to 1576 proteins in 227 species: Archae - 0; Bacteria - 85; Metazoa - 789; Fungi - 248; Plants - 1012; Viruses - 7; Other Eukaryotes - 987 (source: NCBI BLink).
Link
InterPro Scan - TAIR