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GT23855

CSHL Arabidopsis genetrap mutant lines

Original: GT23855

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23855

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12187070 [Map]; Strand: c
      • AT4G23310.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 23
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23855 - 3-prime edge 
    AACTCCTCTG TCACAATTAT TGCTGTTGTT GTTTCAATCA CTGCCCTTCT 
    TCTGCTCTTT GTATCTGTTT TTAGTGTCCG CACTAATAGG AGAAAAAAGA 
    TGATTGGACC GATACCGTTG TTAAACGTAC AGAGAAAAGA CACGGAATTC 
    ACGGAACCAC TTGCTGAAAG TAAAATACTC CTCTTTATAG GTCAAGTGAA 
    TAGTCTCTGA TGTATTAAAC TGTTTAAGTT GTTGCTACAG ATGGGGATAG 
    TATTACAACT GCAGGCTCAC TTCAGTTTGA TTTTAAGGCA ATTGTGGCAG 
    CAACGAATAA CTTTTTGCCG ATTAACAAGC TTGGTCAAGG TG

AT4G23310.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23 (CRK23); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 121765 Blast hits to 118949 proteins in 4447 species: Archae - 102; Bacteria - 13740; Metazoa - 44280; Fungi - 10260; Plants - 35406; Viruses - 410; Other Eukaryotes - 17567 (source: NCBI BLink).
Link
InterPro Scan - TAIR