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GT23865

CSHL Arabidopsis genetrap mutant lines

Original: GT23865

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23865

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26825236 [Map]; Strand: w
      • AT1G71140.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23865 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATCTTGTCC AATAAGAGAA 
    AGTATATCAC CAATGTAGCT CCAGAGAACA GAGAGAGGAA TACACACAAG 
    AAACAAAGAG ACAATTCCTG TGTAAGTATG AACACCAAGC TTCTCGTATT 
    GCTTAGCTCC ATTAGCTTGA CCACATAAAG TCTCCAACGC ACTAGCCAAT 
    CCAAACTGTG TGATTACCAC AACCACAATT TAGAATCTTA AGCTAATAAA 
    AAAGAAAAAG AGAAAGATCA AGAAAGAGAC ATACAACGAC GCTGAAACCG 
    GTGACGCTGC AGAAAGAAAC AGCAATGGCG GTGCTAGAGA GGAAAAGCTC 
    ACCGAGATGA CCAACCATCA TTATAGATAT CACCTGAAGA ACATACATAG 
    ACGAGTTCAC TGCAATCATC GGACCGGCGA TGTAACTAAG TTTCTTCGTT 
    TCCCGCAAAA ACCCATCTTT CTTGTTTACT TCATCTCACT CGACCAGATC 
    GTACCGTTAC CCGACCGGAT CGTATCGGTA TATTCATCTC ACTCGACCAG 
    ATCGTACCGT TACCCGACCG GATCGTATCG GTATATTCAT CTCACTCGAC 
    TAGATCGTAC CATTACCCGA CCGGATCGTA TCGGTA

AT1G71140.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink).
Link
InterPro Scan - TAIR