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GT23869

CSHL Arabidopsis genetrap mutant lines

Original: GT23869

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23869

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26825234 [Map]; Strand: w
      • AT1G71140.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT23869 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT GCCTCAGATT GATATTAAAC 
    TTCTACACGA AACGCAGAAC CTTCCTCTTT CTCATTTCTC TCTTTCCTCT 
    GTTTTCATCT TTTGCTCGTC ATCTCACTCG ACCAGAGCTT CTCGTATTGC 
    TTAGCTCCAT TAACTTGACC ACATAAAGTC TCCAACGAAC TAGCCAATCC 
    AAACTGTGTG ATTACCACAA CCACAATTTA CAATCTTAAG CTAATAAAAA 
    AGAAAAAGAG AAAGATCAAG AAAGAGACAT ACAACGACGC TGAAACCGGT 
    GACGCTGCAG AAAGAAACAG CAATGGCGGT GCTAGAGAGG AAAAGCTCAC 
    CGAGATGACC AACCATCATT ATAGATATCA CCTGAAGAAC ATACATAGAC 
    GAGTTCACTG CAATCATCGG ACCGGCGATG TAACTAAGTT TCTTCGTTTC 
    CCGCAAAAAC CCATCTTTCT TGTTTACTTC ATCTCACTCG A

AT1G71140.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink).
Link
InterPro Scan - TAIR