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GT23906

CSHL Arabidopsis genetrap mutant lines

Original: GT23906

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23906

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2226722 [Map]; Strand: w
      • AT5G07170.1 - [+] show detail - Cell cycle regulated microtubule associated protein
        Distance: 1624; Region: intergenic
      • AT5G07180.1 - [+] show detail - ERECTA-like 2
        Distance: 849; Region: intergenic
    Flanking Genome Sequence: GT23906 - 5-prime edge
    AAGCTCGATG ATCTCAAATC TCTCTTAAGC ATCACACGAT GTGTGGTGGA 
    TTTCGATTGT CACAGGAGTA TTTTGGTCCG AGTGGTTCTT TAGGAGAAAA
    GGATGTTTGA TATGGTCACT CAACGCAAGA AAGATGATAA AATGACTTAT
    GAAGATCTTG TTATTGCTAA GGTACACTCA AGTCTTTTTT ATCGTCTTAA
    TCAATCATTG GTTTCTTCTT CTGAGCTTTT GAATACGCTT GGCATATTGG
    AGGACATGCA CATATCGTGA GTGGTTTTCC AACTCTAGCA TAACATCATT
    TAACCTAACA TTGTCTTTGC TTGCAACTAG ACTAAGTAGA ATCAAGACAC
    AACTAGTTTT GTTCCTAATG TAAATTATCT CGCGGAAACA ACAGTATGTC
    GCCATCTGTG TTAATCATTA AAGACACAGA AGGATCAACC TTGGGAGAGG
    CACAGAAATG TTACCACTTC AGATAATGAT TCAGTCGCGG TACTTACAGA
    TTAGTTGCTT CTCTTAATCT CTTGTATCTC ATCCACATAG AGATTTTTCA
    AGACATATTT CGTGCGTGTA CAAATTAGAC ATTGCAATGA AAAAGATTGA
    GAGCTTCAAT GGGAAAACGA TCCTCCATGT TAACAGGTAT AAAAACCTAT
    TGCTTTAATC ATTTCCTTCT AGTATTTGGA CCAAACAAGT GAACAACACA
    TCTCCATCAA TTACATTCTA ACAAGGAGCT

AT5G07170.1

Model type
Protein coding
Short Description
Cell cycle regulated microtubule associated protein
Computational Description
Cell cycle regulated microtubule associated protein; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT5G62240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07180.1

Model type
Protein coding
Short Description
ERECTA-like 2
Curator Summary
Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.
Computational Description
ERECTA-like 2 (ERL2); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ERECTA-like 1 (TAIR:AT5G62230.1); Has 220369 Blast hits to 138160 proteins in 3652 species: Archae - 160; Bacteria - 22012; Metazoa - 72756; Fungi - 10822; Plants - 87289; Viruses - 476; Other Eukaryotes - 26854 (source: NCBI BLink).
Link
InterPro Scan - TAIR