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GT24000

CSHL Arabidopsis genetrap mutant lines

Original: GT24000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24000

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9442017 [Map]; Strand: w
      • AT1G27180.1 - [+] show detail - disease resistance protein (TIR-NBS-LRR class), putative
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT24000 - 5-prime edge 
    GTTGACGATG TCAAAGCTGG CAAAGACAGA AAGAAAGTGG ATGAAATGAT 
    AGGGCTGGTG GTGAAACGCG TTTTAGCTCA AGTCAGGAAT TCACCAGAGA 
    ATGTTGCAGA CTACACTGTT GGGCTGGAAT CATGTGTGGA GGATTTGATG 
    AAGCTGCTCA ACTTTAAACC CACTTCTAGT GTTCAGTTCT TGGGAATTTA 
    TGGTATGGGT GGTATTGGCA AGACGACCCT TGCTAAATAC TTTTATAACA 
    AGATCATTGT CAACTTCGAG CATCGAGCAA TCATCTATGA CGTTAGAGAA 
    CAATCATCAA CCCAAGATGG CTTAAACGAT CTCAAAAGAA CTTTCAAAGT 
    TGCTCGTGAG AAAAAAAATA TTGTGGTTTT AGATGATGTT GATAACATCG 
    ACCAGGTTAA TGCGCTCGTT GGTGAAACAA GCTGGTATGG TGAAGGAAGT 
    CTAGTAGTCA TTACTACCAG AGATGAAGAG ATTCTGAATA GGCTCTCAGT 
    GAACCTACAA TATGAGGTCA AGTGCTTGAC TGAGATGCAG GCATTGAAGT 
    TGTTCTGTTT TTATTCACTA CGAAAAGAAA AACCACCAAC AGAGGGTTTA 
    TTGGAGCTGT CCAAGAAGAG TGTCGAGTTA ACAGGACTGT TG

AT1G27180.1

Model type
Protein coding
Short Description
disease resistance protein (TIR-NBS-LRR class), putative
Computational Description
disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink).
Link
InterPro Scan - TAIR