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GT24052

CSHL Arabidopsis genetrap mutant lines

Original: GT24052

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24052

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8148797 [Map]; Strand: c
      • AT5G24100.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24052 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT GCTCATAACT ATCTCTTACA 
    TTCTCTCTTC TCAATTCAAA CTAAAGTTTC AGCCAGTCCT TTAATGAGAT 
    TCCGCATTTG AACTGTAAGT TATTTTTTAT TTTATCTTCA CTTTCTTTGC 
    AATTACGTCT GAAGAATCTG TTTGGCTTAT ACATTTGATG ACTTCAACTT 
    TTGGAATGTT CTAATTCAAA TGTCATTTTA GGCATGAATA AGTGTAGTTT 
    TAGTTTCGAA CCATGTCTCA AAGTGCATAC ACTTGATTTG ACAAGAGAAA 
    ATAAAATTAT AAACAAAATG ATGAAAAGAC CATAATATTG GGGGAAAGTA 
    CAGGAATGAT TTTTTCTTTT TCTTGGCAAA ATCGTTAAAA ATCTACATTT 
    TCTCATACAA TAATATTATC TAATGCAAAT ATAAAAGTCT CCATCACATA 
    ACCAGAGAAA TTAGTAAGAA AATGAGTAGA GGAAGATCTT TCACCTTTTA 
    TTTTGTTTTA TTTCTCTTCT TTGGATCACC GGCTCTGTAT TCTCAGGTCA 
    CCGGTGATCT ACCCGGTGAC AAACAAGCCC TTCTCGATTT CCTCAACAAC 
    ATCATTCACC CACGGTCTCT

AT5G24100.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G53320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR