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Mutant Lines
GT24135

GT24135

CSHL Arabidopsis genetrap mutant lines

Original: GT24135

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24135

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 21071219 [Map]; Strand: w
- AT3G56910.1 - [+] show detail - plastid-specific 50S ribosomal protein 5
  Distance: -863; Region: promoter
- AT3G56920.1 - [+] show detail - DHHC-type zinc finger family protein
  Distance: 0; Region: exon2 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT AGTCTTCCCC CACAGTAAAA 
TTTCTGAAAC ACGAAAACAA ATAGAGAAAC TCCACTTCAG ATGATGATTT 
CATATAGACA GAAGCTAGGA TCTTGCTTTT GCTAAAATCA TGTGTGAAAC 
AATACACAGA AAAATCTTAG ACTATTTCCA TTGAGAGAAT CTTAAAAGCT 
CATGTTCTTC AAACTTTAGC ACAGAGAGAA GCAGAGCATA TATTAGTAGC 
AAAATCAATT CCGAGCATCT TGAGGTATTT TCCTCATTCA TGATTCTTAT 
CTTCCAAAGT TAAAATCCTA TAAAAATCCA CAATGCGGTT TTAAAAATGT 
AAATTTGCTG TCAAATCATC AAAAGTCTTA CATTTTTGGC GGGCCAAACT 
TGATAAATCC TTTTTCGTTC AAAATTCTGA AAAGACATAA CGTTTTTCTT 
CGGGGAATGA AACTCAAAAA TGTTATTCGC TTTATTTCCA GTCTCAAAAT 
CCGCGGCTAA ACACGTCCTA CAGCTCCATA TCCAAGTTTC CTCAATTCAC 
AGCCAAGCAA ATGAAACCGG CAATATCCAA ATCGTGCCGC CAATGGTGCG 
GATTTTGTTC CCCTTCTTTC GTCTTCTGAT TATGGTTTCT GTTTGATAGA 
TTTGTTTCTT TCTCCCTCTC CCCCTTTCCC CAAAAATTTG TCCCCCCC

5 prime edge [+] show sequence

Chromosome: 3; Position: 21071312 [Map]; Strand: w
- AT3G56910.1 - [+] show detail - plastid-specific 50S ribosomal protein 5
  Distance: -956; Region: promoter
- AT3G56920.1 - [+] show detail - DHHC-type zinc finger family protein
  Distance: 0; Region: exon2 (CDS)

TAGTGTTTGG TCCAGATGCA TCGTCACTTC TTTTGACCAC ATGTATGATA 
GGAGGGCCAG CTATCGCTTT CTCCATCAGG ATGGCTTATT TGATAAGCCA 
TCGTCACCCT TTCTTTCATT CTCTTACTTT GATTGGTGCA ATTCTTCTCA 
CATTCATGGT ATAACTATAA AGCTTTGCTA TTTACTTACT TTCATAAGCC 
AAGTCATACC TTAAGCCAAA TTCATGCATC TTCTTACGTC TTACTTTTTA 
TCTAGGCTTT CACTTTTCTC TTCTTGACAT CATCGAGAGA CCCCGGGATT 
ATCCCAAGGA ACAAACAAGT GTCTGAGGCA AAAATTCCTG ATGTTACCAC 
CCAATCGACA GAATGGGTGA CTAGCAAATT AGGAAGTGTG AAACTACCTC 
GAACAAAAAA TGTAATGGTG AATGGCTTCA CTGTCAAAGT GAAGTTTTGC 
GATACCTGTC AGCTATATCG TCCTCCTCGT GCCTTTCACT GCTCAATCTG 
CAATAACTGT GTCCAAAGGT TTGATCATCA CTGTCCTTGG GTTGGTCAGT 
GCATCGCCTT GGAAAGTCTT ACTATTAATT CTCACTTCCT AAACAAAAAA 
C

AT3G56910.1

Model type: Protein coding
Short Description: plastid-specific 50S ribosomal protein 5
Computational Description: plastid-specific 50S ribosomal protein 5 (PSRP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G56920.1

Model type: Protein coding
Short Description: DHHC-type zinc finger family protein
Computational Description: DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G40990.1); Has 5096 Blast hits to 5086 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2197; Fungi - 759; Plants - 834; Viruses - 0; Other Eukaryotes - 1306 (source: NCBI BLink).
Link: InterPro Scan - TAIR