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GT24143

CSHL Arabidopsis genetrap mutant lines

Original: GT24143

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24143

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7205379 [Map]; Strand: c
      • AT5G21170.1 - [+] show detail - 5'-AMP-activated protein kinase beta-2 subunit protein
        Distance: -183; Region: promoter
      • AT5G21170.2 - [+] show detail - 5'-AMP-activated protein kinase beta-2 subunit protein
        Distance: -288; Region: promoter
    Flanking Genome Sequence: GT24143 - 3-prime edge 
    TACCGACCGT TACCGACAGT CACCTGGGCC CTGTGTCATT ATCCTTCTCA 
    AAGGCATTGA ACCAACTTTT TATTCACATT TGTTTATTAT ATACTAAAAG 
    AAATAACCAA AAAAAAGTGG ATAATTATAA ACTTTTGGAC GCCAAGTCAC 
    TCGTTTATCC ATTTGGTACG GATTTTAATG ATATCTCTCT CTCAAGAGCC 
    CCTTTTATGC AAAATCTCTT TTTCGCTACC AATGGCATTA TTCGTAATTA 
    ACTTCTAACT TGAGGGGCGT TTCATTATCT CCCCCTCGTC GTCCTCCCTC 
    CATTTTTCTT CACGTCTGGT TTTCTCTCTC TTTTCCTCTA TCTTTTCCTC 
    TATCTCTCTC CTCTCTTCAT CTCACTCGAC AAAAGAATTT GGGCTTTTTC 
    TGATGGGAAA TGCTAAGGGC AAAAACAAAA ACCCCCCCCC CGATACCGGT 
    GGGGCAAATT TTACCTCCTC CCCGGCAAAA TTTAATGGCG GCGATCCT

AT5G21170.1

Model type
Protein coding
Short Description
5'-AMP-activated protein kinase beta-2 subunit protein
Curator Summary
Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism.
Computational Description
AKINBETA1; FUNCTIONS IN: AMP-activated protein kinase activity; INVOLVED IN: N-terminal protein myristoylation, cellular response to nitrogen levels; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT4G16360.3); Has 697 Blast hits to 689 proteins in 198 species: Archae - 0; Bacteria - 3; Metazoa - 248; Fungi - 167; Plants - 204; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G21170.2

Model type
Protein coding
Short Description
5'-AMP-activated protein kinase beta-2 subunit protein
Curator Summary
Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism.
Computational Description
AKINBETA1; FUNCTIONS IN: AMP-activated protein kinase activity; INVOLVED IN: N-terminal protein myristoylation, cellular response to nitrogen levels; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT4G16360.3); Has 674 Blast hits to 666 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 149; Plants - 202; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link
InterPro Scan - TAIR