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GT24175

CSHL Arabidopsis genetrap mutant lines

Original: GT24175

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24175

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3369801 [Map]; Strand: c
      • AT3G10760.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24175 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTTTAC CTCCTCTGTT 
    TTTTCAAAGA TAAAAATGAG AGAAGACGAT TCAGACTGGT TCGCAAGATG
    GGAAGAAGAA CTTCCATCAC CAGAAGAGCT CATGCCAATA TCACAATCTC
    TAATCTCACC CGATCTAGCT CTAGCCTTCG ATATACGAAC CCCAAATCAC
    GGAAACGGAA ACTCAAACCA ACCTCATCAT CATCATCATC ACCAAACCAC
    ACCTCCTACA CCGTCTCAGC TTCAGCTTCC ATCTTCTCAA GCCAATTCCT
    CAGCCGAATT CGCTGCAGAT TCAGCAGATC TAGGCTCCGG AGGAGCTGCC
    GGAGACGAAC CAGCTCGGAC TTTAAAACGA CCTCGTCTTG TCTGGACACC
    GCAGCTGCAT AAACGTTTCG TTGATGCTGT TGCGCATTTA GGGATTAAGA
    ACGCAGTTCC TAAAACGATT ATGCAGCTTA TGAGTGTTGA TGGTTTAACT
    AGAGAAAACG TTGCGAGTCA TTTGCAAAAG TATAGACTTT ATCTTAAGAG
    AATGCAAGGT TTGTCTTCTG GTGGTGGTGC TGGTTCAGAT CCAGCTACTG
    ATCGTCTTTT CGCTAGCTCT CCTGTTCCTG CTCACTTTCT TCATCCTAAT
    CGTGTTCCCA GTTCTGATCA TTTCATGCCG TCTTTTGTTC CTATTGCTAC
    TC

AT3G10760.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR