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GT24177

CSHL Arabidopsis genetrap mutant lines

Original: GT24177

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24177

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5432232 [Map]; Strand: w
      • AT5G16590.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24177 - 5-prime edge 
    CGGTCCTCTC CCGCCGGATT TCGCAAACCT AACTCTTCTC CGTTACTTGT 
    ATCTTCAAGG AAACGCATTT TCCGGCGAGA TTCCTTCGTT TCTTTTCACT 
    CGACCAAACA TTATTCGGAT CAATCTCGCC CAGAATAATT TCTTGGGTCG 
    GATCCCGGAT AATGTCAATT CTGCAACCCG GTTAGCTACT CTTTACTTGC 
    AGGATAATCA ACTCACCGGT CCAATCCCGG AGATTAAGAT TAAGCTTCAA 
    CAGTTTAATG TCTCATCCAA TCAGTTAAAC GGGTCGATTC CGGATCCGTT 
    GTCGGGTATG CCCAAAACCG CCTTTTTAGG CAATTTGCTC TGTGGGAAGC 
    CGTTAGATGC TTGCCCTGTC AATGGCACTG GAAACGGTAC TGTGACGCCT 
    GGAGGAAAAG GGAAAAGCGA CAAGTTATCT GCCGGAGCTA TTGTCGGAAT 
    AGTGATCGGC TGTTTCGTCT TGCTTCTCGT GCTTTTCTTG ATCGTGTTCT 
    GTCTCTGTAG AAAGAAAAAG AAAGAGCAAG TCGTCCAATC GAGAAGCATC 
    AAAGCAGCTC CTGTTCCGAC CTCTTCAGCA GCCGTGGCTA AGGAATCGAA 
    TGGTCCTCCT GCGGTGGTGG CTAATGGTGC ATCTGAAAAT GGTGTATC

AT5G16590.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR