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GT24249

CSHL Arabidopsis genetrap mutant lines

Original: GT24249

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24249

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1357021 [Map]; Strand: c
      • AT2G04070.1 - [+] show detail - MATE efflux family protein
        Distance: -1231; Region: intergenic
      • AT2G04080.1 - [+] show detail - MATE efflux family protein
        Distance: 168; Region: intergenic
    Flanking Genome Sequence: GT24249 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTGATTATAG CCGCAGGTGT 
    TTTTGGGGTT TCTGGATCGA GAAGCGCCTC GCTACACAAG GGATTATTAA 
    TCCCGTTTGG AACTAATGAG TTTTTATTTA CTAGTTACAT TTGTTTACCA 
    AAGATTGAAG AAAATAAATA AATCAAAACC AGATTTTTCT AATAATTTTT 
    CTAACTAACG AAAATATCAA CTTAAGAAAA AATGTATAAA ACCTGGATTT 
    TTACAAAAAA TATTGTAACC CATCAAAATA ACATTACATG TTTTTTACAC 
    ATGACTTTCA AATACTTTGA GATATCTCTC AGGAACAACC TTTATTTAAA 
    CCAATCCATT TTCAGTTGAA ATTATTCTCT TCCTTGCCTT CTCAGCCTGC 
    AAATAATAAA GTCTAGTTAC TTCAAAGCAT TCAAAAAACT AAAATGTAAC 
    AAACTCTAAC CTGTTCCTTC CAGTTCAGGG AGGCTGGGAC GATAGCCAGT 
    AAAGGGGCTT GCACCGCGGA TCCAACCATA ACACCGCACC AAAGTCCTTT 
    TCCATTC

AT2G04070.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: transport, drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04080.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04070.1); Has 9518 Blast hits to 9397 proteins in 1914 species: Archae - 186; Bacteria - 6503; Metazoa - 146; Fungi - 326; Plants - 1327; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink).
Link
InterPro Scan - TAIR