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GT24261

CSHL Arabidopsis genetrap mutant lines

Original: GT24261

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24261

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 214470 [Map]; Strand: c
      • AT2G01470.1 - [+] show detail - SEC12P-like 2 protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24261 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ACTCTCGAGC TCAATGCCAA 
    GTCCCCACTG ATTCGTAAAA ATACTAAATA CAAAAAAAAA TATTAATGGG 
    CTAACTTAAG GCCCATTACA GTATTTATAG GCCCATCATA ATATTTCATT 
    TATCGCTAAA ATCCGGTAAA GTGATAGCGG TTGGACCCGG TTCACGGGAT 
    AAAGACGGGA AAGAGTACGG CGGTACGGAG GTCAAACTCG GCGAGAAAGA 
    GTACGTATAC CGGATCCTTT AATTTTTATA ATATTTTCAT TTATCACCCC 
    AATACTATTG ATTTGATCTA AAAACACCCT ATAGTTGGGT AAAATTCTTA 
    AATCGATGTG TTGGGGATTT TTGACGTAGG TATCATCTGT TTCGGGACGA 
    GGACATCCTT GGTACATTGC ACGAGTAAAA TGCAAAGGAA GTCTCTGAGT 
    CAGCTAGGGG GTTTCTTGGG GGAAAAAAAA TTTTTCAGGG ACTCGTTTCG 
    ATACAGGTTG TTGAAATTTG AAAGTTTTGT TATTTCTCAT CATTTTGTTC 
    CCCCTTAAAT TTGGCCCTTT TAAAACTGCC TTTATCTTAT GTCAAACCGT 
    TTTCGGGGAT TTATATCTTT GAATTTAGGG GG

AT2G01470.1

Model type
Protein coding
Short Description
SEC12P-like 2 protein
Curator Summary
Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.
Computational Description
SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).
Link
InterPro Scan - TAIR