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GT24270

CSHL Arabidopsis genetrap mutant lines

Original: GT24270

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24270

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2020306 [Map]; Strand: w
      • AT3G06520.1 - [+] show detail - agenet domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24270 - 3-prime edge 
    AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAG AGGTCACCGC 
    CGCGCCAAAA TCGATCGCTC GTCATCAGTG GACAATTTGT GCAACCCAGC 
    GAGAAACATA GGGATAGGAG TAAGACTGAA GATGAGGAAA TTTCCAGAGA 
    CCTTGATTCA ACAGAAGAAA ATCAGAGAAG AGTGAGAGCT ATTATATATA 
    GAGAAAGAGA CAGTGGCGAC ACAAGCATGC TTATATTATG AGTCGGTCAA 
    GATAGGTCAA TGCCGAAAAA AGGAAAACAC CAAAACAGCA CCTCGTTTCT 
    AATTTAGGTA ATACAACGTC CTGTTGTTTT TCTTTATCCT TCATCTCACT 
    CGACCAAATC GTACCGTTAC CCGACCGGAT GGAATCGAAA TATTCCCCTC 
    ACGCGACAAG ACGGTATCGT TACCCGAC

AT3G06520.1

Model type
Protein coding
Short Description
agenet domain-containing protein
Computational Description
agenet domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 523 Blast hits to 271 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 518; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR