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GT24377

CSHL Arabidopsis genetrap mutant lines

Original: GT24377

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24377

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16626576 [Map]; Strand: c
      • AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: GT24377 - 3-prime edge 
    TTGCTAGCTA CATACACTCC GAGAAAAAGA GAGTTTTGTT CATCAAAATC 
    TTCTGAGTTT GTATCAAATT GCTAGAAGAA AGAAAGAATA CCTCAGAGAA 
    TGTGTTGAAA TTGTGTTTAG ATGCAACAGG CTCCATTCTT GCTATAATCT 
    GCTCACAAGC GTCTAAAACT GCAGCACCAT ACATATCAGA ACTCGCAGAA 
    GCAGCAGTAG GTGACGCATT AGGAACCTGT TACAAGGCAA TCAAAACGAC 
    AAGAGAGCAA AAACTGTGAG GCATTTGGAA CCTATTAAGA GACCACAGAA 
    ATGATAAGAG AGAACAACAA CAGTTTTGTC TGACTACGTC TTGGCCAAAA 
    GTCCACTGCT TGTAACCGAG TTAAATGTAC CTTGTCGGTG CTTGTTTCTG 
    ACACAAAAAC CGAACTAAGG AGAATGTTAA AGGCCGTTGC AGCAACTTGA 
    GCAACCTTTG TATGCAACCC TTGGCCCATC TCAACACCTC CTTGTGTCAC 
    CAAAACAGTC CCATCGGTGT AAACGTGAAC AAGAGCACCG GCCTGTGACA 
    GCCGTTTAAT TATATATTGG ATTAAGTATC TCAAAATTCA AATTCTAGCT 
    TTGAACGGTA GTGCAATGGT GAGATTTCCA AGGAAGCTTT

AT4G34900.1

Model type
Protein coding
Short Description
xanthine dehydrogenase 2
Computational Description
xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).
Link
InterPro Scan - TAIR