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GT24436

CSHL Arabidopsis genetrap mutant lines

Original: GT24436

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24436

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23410084 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24436 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ATCTATGAGG GCTATGCTCT 
    CTCTTGTTAA GGAGATAGTT CCCGCAAGGA TTGATCCCAA AACCTCAGAT 
    GCCTCTCTCT CTCTCTCCTA CACAGCCCTC GAGTCCGGTG AGGGAGCAAA 
    GATCAACTCT ATGCCTCTCT CTTACGTTCC TGCCATTGAT CAAGAACAAC 
    TTGTGGAGAT CATGAAGGGT AAGGACTTAC CGGGCATCCA AGCGCTGGGC 
    GGCGTGGAGG GTGTCGCCGC TTCCCTTAGG ACTAACCCCA CCAAAGGGAT 
    CCACGGGAAT GAGCAAAAAG TCAGTAGACG CCGTGACCTC TTTGGCTCTA 
    ACACCTACCA TAAGCCACCG CCTAAAGGAC TTCTCTTCTT TGTGTATGAA 
    GCTTTCAAAG ACCTAACCAT CTTGATCTTG TTGGTCTGCG CTATTTTCTC 
    CCTTGGCTTC GGTATCAAAA AACATGGCAT CAAAAAAGGT TGGTATGAAG 
    GCGGAAGCAT CTTTGTAGCA CTCTTCTTGG TCATAGTTGT CTCTGCTCTC 
    AGCAACTTTA GGCAGGAGAG ACAGTTCGAC AAGCTGTCCA AAATAAGCAA 
    TAACATCAAA GTGGAAGTCC TTCGGGACAG C

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23410159 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24436 - 5-prime edge 
    TTTCTCCCTG GCTCTAGAGT AGATGGCAGC GTAGGCAAAA CGCCAACGCC 
    TCTGGGCCTT GTTGAGGCTG GAGGTGGTAA GGTTGAGCAA AAGTGCACTG 
    TAATCATATT CCTTGAGGTC CCTCATGCTT TATTTGTGTG AAAGAAAGAG 
    AGTTTTTAGA AGGAAAAGAG TCTCGCTCTC TCTCAACTAA ATGTGGTGTT 
    ACTTGTAAGA CACTTAAGAC TCGCAAAGAA TGATTTCTCT CTCTCTAATA 
    CCCTAAGCTT CGTGGTACTA TTTAAATCCG TATTGGCCGC CTTTTGATTG 
    CTATTTATCT GCTTTAAAAT ATTAAATATC TCGTGTAAAG TAACTTGTCC 
    TAGTTTAATA TTTTCAGGCG GTGGAACCAC TCAAAAACGT TGTAAACACG 
    AAGTCATGTC GATCAAAGGA CATGGGCCGC ACATCCTTTT GTACTTGTGT 
    TTTGACTTAC CTGTTGTCTC GTGTTTCGGT TTGGAACCAC TGTGCCCTAC 
    AAGAGAGAGT TAATCTGAGA TTTTGGTAGT AATTTCTAAA GCAGCCGTAT 
    GATGTAAT

AT3G63380.1

Model type
Protein coding
Short Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink).
Link
InterPro Scan - TAIR