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GT24466

CSHL Arabidopsis genetrap mutant lines

Original: GT24466

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24466

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26660442 [Map]; Strand: c
      • AT5G66770.1 - [+] show detail - GRAS family transcription factor
        Distance: -158; Region: promoter
    Flanking Genome Sequence: GT24466 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTGGTGT GTTTATATCG 
    GTATTATTAC CGTTACAAAT ATCATTGTCT TAAAAATAAC AAAGAAAAAT 
    GTGTGGGCCC ACAATGAAAT CAGACGGTCA GATTTTAATC AAACGTTGAT 
    CCACTTTCTA GGGCTGACCT TTCTTTCTTC TCCTCTCTTT ACCTCTCTCT 
    CTCTTCTAAA ATCCAAAGCT TGAGATCCCG CCGTTTCTCT CTGGTCATCA 
    TCCTCTTCTT CAGTGACCGC AAATCTGCAG GTTTGGCAGT GGTTTTTATA 
    GACCGCCGGG AGGGTTAGAT CTAGGCGTTA AAAATGGCTT ACATGTGCAC 
    TGATAGTGGC AATCTAATGG CTATTGCTCA ACAAGTCATC AAACAGAAGC 
    AGCAACAAGA ACAACAACAG CAGCAACATC ATCAAGACCA TCAAATTTTT 
    GGTATTAATC CTTTGTCTCT TAACCCATGG CCCAATACTT CCCTCGGGTT 
    TGGGCTTTCA GGTTCGGCTT TTCCCGACCC GTTTCAAGTT ACCGGCGGCG 
    GAGATTCCAA CGATCCTGGC TTTCCTTTTC CTAACTTAGA CCACCACCAC 
    GCCACAACCA CCGGCGGTGG GTTCAGGTTA TCTGATTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5797803 [Map]; Strand: c
      • AT5G17590.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24466 - 5-prime edge 
    TGCCTTTTAG GACTTTACCT GGTCCGTACT GATACGAACC CTCTGTTTCT 
    ACAAGGGGGT ATGGTCTATG TTGGTGTCCC GCGGCTCTTT TCGTTCTTGG 
    CTTACGTTTA CTCCTGCGTC CTCAAACCTT GCGTCATCTT TGTTAGCCAG 
    AGCACCATCT TTAATAGCAA GAGCGTTACC AGTTTCGATC CGGAGAAAGG 
    CGATCCTAAC AAGGCTCCGG AAACCGTCAC GACAAATTCG GATCCGGCGC 
    CAAGGAATTC ACCGAGGGAA GGTGAGAAGC AGGTGCAATT CGGGAATGTG 
    GTGGTTCTTG GGGATGAAGA AGGGGGAAAG GAGGAAGATC ACAACAAGAG 
    AAGTTCTAAT AAATTGATTC AAGAACATAT GCGAATCCAA GAAAAAGAAG 
    ATCAAGAAAA TTGTAGATCG AATTCAAAGA TCATGGATAA TGAAAGTATT 
    GTCGATAAGA ACTGCAATAG GACTCCATTA AGAGTATCGA ACGGAAACAA 
    AAGATCTGAG ACTGGATGAT CGATATCTAT CGCTGGGATC AAGACCTGAT 
    CTTTTTATCT TTCAGGTTGT GCAAACATGA TTGAAC

AT5G17590.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66770.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G50650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR