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GT24480

CSHL Arabidopsis genetrap mutant lines

Original: GT24480

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24480

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22961960 [Map]; Strand: c
      • AT1G62120.1 - [+] show detail - Mitochondrial transcription termination factor family protein
        Distance: -181; Region: promoter
    Flanking Genome Sequence: GT24480 - 3-prime edge 
    GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTC ACATGAACGC 
    AACTTCCACA TGGGAAAGTC GTCATCAGAT ACATGAAGCT TCATTTGGAT 
    ACGGTTCTTG ATTTCTTCAA GTGTTTCTAT GCTTTCAAAG CAAAGATCGT 
    CCGATTGATC GAAAAGGGAA AAAACATTTG GAACTAGAGA CCGAACCTGA 
    CTGGTTTAGT TGAAATGTGA ACCGTTATTA ACTATTTAAG CTAAAACAAA 
    TTGTTGAAAT GTGACTACGA CAAGAATATA AGTCATTTGA AACTACCAGT 
    GACCGAACCT GACAGGTTTG TATCAAAACT CCGACTAAAA CCTGTTATTC 
    TGTCAAAACT CACTATACCT TTATAGTTTA TACTGTTTTA TGACTATCTA 
    TCTATTCACG TGAACATATT ATATACAACA CATTCTGCTT CTGAAGTAGA 
    CTCAATCCTA CACGTACTGG CTGAATGATT CATTCCTTCT GGATCCACCT 
    TCCCCGTAGT CTTCGTTCCA TTGTCGAAGC GCTGTCATGT TGACAGACTT 
    TGATGAGATG CTCATACTCA CCTGATTCAA CAACATCGAC AACAGTTATA 
    CAGTTCTCTG AGCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5797799 [Map]; Strand: c
      • AT5G17590.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24480 - 5-prime edge 
    TTTTAGGACT TTACCTGGTC CGTTCTGATC CGAACCCTCT GTTTCTACAA 
    GCGGGTATGG TCTTTGTTGG TGTCCCTTGG CTCTTTTGGT TCTTGGCTTA 
    CGTTTACTCC TGCGTCCTCA AACCTTGCGT CATCTTTGTT AGCCAGAGCA 
    CCATCTTTAA TAGCAAGAGC GTTACCAGTT TCGATCCGGA AAAAGGGGAT 
    CCTAACAAGG CTCCGGAAAC CGTCACGACA ACTTCGGATC CGGCGCCAAG 
    GAATTCACCG AGGGAAGGGG AAAAGCACGT GCAATTCGGG AATGGGGGGG 
    TTCTTGGGGA TGAAAAAGGG GGAAAAAAGG AAAATCACAA CGAGAGTAGT 
    TCTAAAAATC TGATTCAGGA TCATATGCAA ATCGAAAAAA AAAAAAATCA 
    AAAAAATGGT AAATCGAATT CAAAAAGCGA TAATAATGAA AGTAGTGTCA 
    ATAAGGACTG CAAAAGGACT CCATTAAAAG TATCGAAGGG AAACAAATGA 
    TCTGAGACGG GATGATCAAT ATCTATCGTT GGAATCAAAA CCTGATTTTT 
    TTTTCTTTCA GGTTGTGCAA ACATGATTGA ACAAAAAAAA AAAGGTTTTA 
    AAAAAA

AT1G62120.1

Model type
Protein coding
Short Description
Mitochondrial transcription termination factor family protein
Computational Description
Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G62085.1); Has 885 Blast hits to 817 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 860; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G17590.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR