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GT24497

CSHL Arabidopsis genetrap mutant lines

Original: GT24497

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24497

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21072370 [Map]; Strand: c
      • AT3G56920.1 - [+] show detail - DHHC-type zinc finger family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT24497 - 3-prime edge 
    GACCGTTACC GACCGTTTTC ATCCCTAGGT TGGATCCATA GCCTCTGAGC 
    TAGTCAGAGC CTTTGGTCCA AAAGACACGA AAATGAGCAG TGGAAAGTCT 
    GATTCCGAAG CTAGAGAACG GTAACAACGG TGGCACGGCT GTCAAGAGAT 
    AAGTATGGAT GAAGACGCCA CAACGACTGC TTTGGTCTAC CAAGAACCAG 
    CGGAAAACAA GGAGAAGCTC GAGCGTGGAA GTGAGATCAA GATAGGCCAA 
    AGTAAAGGAC AAACAGGTGT AAAATCTACT TTTGTAATTC AAAGCCATGT 
    AGCTCTCTTT CTCTCTTTAC TCGTCAAGAT GAGTTTTAAA CTTTTTCCCA 
    TTAAGAATAG GAATTAGGAG AATTGGTGTA CATAAATAAT CGTTTCTTGC 
    GTTACAGGTA ATTCAATTTG GTGTTTATTA TTGTCTCCAT CTTTCTTTTT 
    AGGGTTCATA TAATGTATAG TGTTTCTTAG GTCTTACGGT AAGGGGTTTA 
    TAAAAAAAGA AAAAAAATTT GCCAATAGAG AAAACAAAGA GACAGAGGGA 
    TGTGAAAAGA TGATGATGAT TCGTTGGTAT GTTTAATCTT CTATTTCTAT 
    ATATAAAAAA GCTCAAAATA CTTTACCAAT TGAGCAAAAG CTATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5797778 [Map]; Strand: c
      • AT5G17590.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24497 - 5-prime edge 
    GTTCTGATCC GAACCCTCTG TTTCTACAAG CGGGTATGGT CTTTGTTGGT 
    GTCCCTTGGC TCTTTTGGTT CTTGGCTTAC GTTTACTCCT GCGTCCTCAA 
    ACCTTGCGTC ATCTTTGTTA GCCAGAGCAC CATCTTTAAT AGCAAGAGCG 
    TTACCAGTTT CGATCCGGAG AAAGGCGATC CTAACAAGGC TCCGGAAACC 
    GTCACGACAA CTTCGGATCC GGCGCCGAGG AATTCACCGA GGGAAGGTGA 
    GAAGCACGTG CAATTCGGGA ATGTGGTGGT TCTTGGGGAT GAAAAAGGTG 
    GAAAAGAGGA AAATCACAAC GAGAGTAGTT CTAATAATCT GATTCAGGAT 
    CATATGCGAA TCGAAAAAAA AAAAAATCAA AAAAATGGTA GATCGAATTC 
    AAAGAGCGAT GATGATGAAA GTAGTGTCAA TGAGGACTGC AAAAGGACTC 
    CATTAAAAGT ATCGAACGGA AACAAATGAT CTGAGACTGG ATGATCGATA 
    TCTATCGCTG GGATCAAGAC CTGATCTTTT TTTCTTTCAG GTTGTGCAAA 
    CATGATTG

AT3G56920.1

Model type
Protein coding
Short Description
DHHC-type zinc finger family protein
Computational Description
DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT2G40990.1); Has 5096 Blast hits to 5086 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2197; Fungi - 759; Plants - 834; Viruses - 0; Other Eukaryotes - 1306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G17590.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR