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GT24510

CSHL Arabidopsis genetrap mutant lines

Original: GT24510

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24510

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2905239 [Map]; Strand: c
      • AT3G09440.2 - [+] show detail - Heat shock protein 70 (Hsp 70) family protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G09440.1 - [+] show detail - Heat shock protein 70 (Hsp 70) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT24510 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AATTAAAACG ATGCTATATG 
    TATATTTTGC CTAAAGGCTA AAATTAGTAA CATTAGATCG AAAATTGAAT 
    CTCACTAGCT CCAGCAATGT TAAAACATTC TTATGAAACC CTAAATCATC 
    GCTATGGATC TACCGATTAC AGATCTACTT ATAATCCAAG TTCGAAAGAC 
    AAATTTAGCA AGAGGAAACG AGTGAAACGT ACCGAAAACA GTGTTAATCG 
    GGTTCATGGC GACCTGATTC TTTGCGGCGT CACCAATCAA CCGTTCGCTA 
    TCAGTGAAGG CGACGTAAGA CGGTGTGGTT CTGTTACCTT GATCATTAGC 
    AATGATCTCA ACACGGTCGT GTTGCCAAAC TCCAACGCAA GAGTAAGTGG 
    TACCGAGATC GATACCAATC GCTGGACCTT CTCCTTTACC AGCCATTGTT 
    AACGCTACTC AGGATTAAGC TAAAAAATCG AAAGAAAGAT TGTGAAAGAG 
    GAATTGTGAA TTGCGGCTAG GTTTGTTTTC TTTTTTCCAA AATATCAGGT 
    CGAAGGAGAA GTCTATATAG AGTCTTGTAC TCGAGTTTCG AGAAGGTTCG 
    ATGGCTCGCT ATGTAACCGC ACGATCTTTT GGAGTTGGAT CTGACGGTCC 
    AGGAATGATT CTTTTCTCCT ACTTTTCCTT TTCCTTTAAC AAATAAGGAA 
    AGCCGTTTAA A

AT3G09440.1

Model type
Protein coding
Short Description
Heat shock protein 70 (Hsp 70) family protein
Computational Description
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to karrikin, response to heat; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34172 Blast hits to 33801 proteins in 4833 species: Archae - 161; Bacteria - 16465; Metazoa - 3857; Fungi - 1750; Plants - 1254; Viruses - 309; Other Eukaryotes - 10376 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09440.2

Model type
Protein coding
Short Description
Heat shock protein 70 (Hsp 70) family protein
Computational Description
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to karrikin, response to heat; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1).
Link
InterPro Scan - TAIR