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Mutant Lines
GT24568

GT24568

CSHL Arabidopsis genetrap mutant lines

Original: GT24568

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24568

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 19139227 [Map]; Strand: c
- AT2G46610.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -465; Region: promoter
- AT2G46610.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -513; Region: promoter
- AT2G46620.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon1 (CDS)

TTACCGACCG CTACCGACCG TTTTCATCCC TACTCATATC ATCAGAAACA 
GCCTCCGACG TCGACTTTCT CGAACCATTT TCTAAAAGCA AACGTCGTCC 
AGTTCCTCTC CGACCACCAT CAGTCTGCAA AGCATTGATG ACATGCTTCA 
ATGCACGAGT CGGCGAGTTA CGATTCGCGA TCATCAACTC TCCGATCTCG 
GCGGGACTCA AAGACGCACC GTTTTGAAAT ATTCCTTCAA CTTGAGAGAA 
AAGCTTGTGC TCTTTAACAC CTAAGTAGTT ATTAGCGAGC GTTTTAAACG 
CCGTGAAATC ACATAAGGGA AAATGAATGT GTACGTCGAC CCGACCCGGT 
CGAAGCATAG CCGGGTCAAT TTGTTCTTTC CCAGTCATCG TAAACACCAT 
GATCCGTTCA TCGGCGGTGC AAGAGCTGAG AATACTATCA GTGAAATTCA 
AAATCCCAGA TAAATTCACA GCCGTTGATT TCGTCGAGAG GTGTCGATCT 
AGATCTTCGA TCACGATCAC TGATTTGCCT CTGGTTTGTA ACAGAAGCAT 
CTTAAGATCT GAATCATCAA CTACTTTGGA GAGATCTATA TCGTAAACAT 
CGTAATCTAA GAAATTCGCC ATTGCTGCGA CGAAGCTTGA TTTTCCGGTA 
CCGGAAGATC CGTATAAGAG ATAACTCCGT TTCCAAACAC GGCCCAGACG 
ATTATAATAC TGTTTACCTT

5 prime edge [+] show sequence

Chromosome: 2; Position: 19139137 [Map]; Strand: c
- AT2G46610.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -375; Region: promoter
- AT2G46610.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -423; Region: promoter
- AT2G46620.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon1 (CDS)

AGTGGTTCGC TTTGCGGCGG TGGCGGAGGA AGTTCGCCGG CGGTGCAGGA 
GTTTAGGAAG TTGTATGGGT TGTTGAGAAT TAAAAGTAGT AGAAAATCTG 
GATCGTTCGA TGTGGCTCGA GAGATGAGGG ACGGCTAGTG ATTAAAAAGT 
TTTTAAAAGT CAGCAGCCAC GTGGGTTGGT TTTATTGGTT GAGAGAGAGT 
CTGGACAAAA AGCGTAGACT AGAGAAAGTT GTTACTCTGT TTTTATTGTT 
TTTGGGTTTT AGTTGATGTA CAGAAGTTTA TAAGATTTTG CTTTTGAGTC 
CCCAAAGTAT GAGATTCTGA GTTTTGAGCA CTTTGTAATT GAACATTTTG 
GGCCGGTTGT AAAACAAAAG CCCATAGCGT TAAGCGGATT AATAATTTTA 
ACGGAATGAC AAATATGCCC TTCATGGTAA CAGCGTCAAT AACACGCTTT 
TCGGTTCATC ATTATAAGAT TTTGTGTCAT TAATACGAAG CTCCGTCTTC 
TTCGCCGAGC GTCATCGTCG TCTTCTAGGG TTCATCTCTC TCGA

AT2G46610.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G61860.1); Has 503542 Blast hits to 501535 proteins in 22149 species: Archae - 10994; Bacteria - 307576; Metazoa - 94329; Fungi - 13527; Plants - 29141; Viruses - 36248; Other Eukaryotes - 11727 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46610.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G61860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46620.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink).
Link: InterPro Scan - TAIR