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GT24571

CSHL Arabidopsis genetrap mutant lines

Original: GT24571

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24571

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19370494 [Map]; Strand: c
      • AT2G47180.1 - [+] show detail - galactinol synthase 1
        Distance: -53; Region: promoter
    Flanking Genome Sequence: GT24571 - 3-prime edge 
    CGACCGTTAC CGACCGTTTT CATCCCTAAA TATAGGCGCT TGGATGGGTT 
    ACGATCGTGA AATCTGATAC GTACACGTGT AAGTAGGAGA ACAGACGGTG 
    GTGATTGGCG TTTGGTGAAA CCGTGAAAGT TCTGGAAAGT GGGACCGTAC 
    CGGAGAAATT TAAACCAAAC GGTTATACGG AGAAAACGCT AGAAGCAGCT 
    AGCTAGCTAC GGTGTTTTGT GGGAAATCAG AACATGTTAT TCCCTGCTAC 
    GAGGTGCATT GTACACTTCC CTAGTCCTCT TTCTTGCATT TTAGTTTAAT 
    ACACACCTTT TTTTTTCTAA GTCATACTTA TTTTTGCTAA TTTATTAAAG 
    TCATTTGCTA ATGTATTTTA ACAAGATACT GAAACCATAC GGGAAAGAAA 
    CAGTGTAGAT AACACTGTAT TGAAAAATTA TCAAAAGGAG TAATCTCTAT 
    CTACAAAGAT CTCATTTTCC ATAACCACTA AAGAGAAACA CTTTTAAAAG 
    TCGAAAATTT CAATTCTTGT TACTTTTCTA ACTACTGATG AGGCACTAAT 
    AATTACAACC TAATTTTAAA AGATTATTGA ATCTAAATAA AATTGCAGTT 
    TCTGAAAATT TAAAAGGAAG TTAGATAACT TCAATTCCAT GCCCTTCATT 
    TCCAATTAAT TATTGTGATA CTACTTTAAA AAAAAAAAAA AA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19370346 [Map]; Strand: c
      • AT2G47180.1 - [+] show detail - galactinol synthase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24571 - 5-prime edge 
    ACTAGATAAA CTCTAAATCC TCACAGCAGA TCACGTGCTA ATCACATGGC 
    TCCGGGGCTT ACTCAAACCG CTGATGCTAT GTCCACCGTG ACGATAACAA 
    AACCGTCACT GCCATCAGTC CAAGACAGCG ATCGAGCTTA CGTGACGTTT 
    CTTGCTGGAA ACGGTGATTA CGTGAAAGGA GTCGTTGGTT TAGCCAAAGG 
    GTTAAGGAAA GTCAAATCGG CTTATCCACT CGTAGTAGCG ATGTTACCCG 
    ACGTCCCGGA GGAACACCGT CGTATACTTG TGGATCAAGG ATGCATCGTC 
    CGTGAAATCG AACCCGTTTA CCCACCCGAG AACCAAACTC AGTTCGCCAT 
    GGCTTATTAC GTCATCAACT ACTCTAAACT CCGTATCTGG AAGGTACGTT 
    TAATACGCCA TCGTTTAACA CCTCTTTTGT TGTGTTTAGC AATACGTCGT 
    CGTCTAGCTC CCTTTGAAAA AGTGGTTAAT GCTCTGTCTT TTTTCTGTGT 
    GTTTGTGCAG TTTGTGGAGT ATAGTAAAAT GATATATTTA GATGGAGACA 
    TTCAAGTTTA CGAAAACATC GATCACTTGT TTGACCTACC AGATGGCTAT 
    TTGTACGCGG TGATGGATTG TTTCTGTGAG AAAACATGGA GTCACACGCC 
    GCANTACAAG ATCAGATATT GCCAACAATG CCCCGACCAA GTCCAGTGGC 
    CAAAGGCGG

AT2G47180.1

Model type
Protein coding
Short Description
galactinol synthase 1
Computational Description
galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR