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Mutant Lines
GT24613

GT24613

CSHL Arabidopsis genetrap mutant lines

Original: GT24613

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24613

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 158387 [Map]; Strand: c
  - AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
    Distance: -205; Region: promoter
  - AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
    Distance: -205; Region: promoter
  - AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
    Distance: -205; Region: promoter
  - AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
    Distance: -205; Region: promoter
  - AT2G01330.1 - [+] show detail - nucleotide binding
    Distance: 0; Region: exon6 (3UTR)
  - AT2G01330.2 - [+] show detail - nucleotide binding
    Distance: 0; Region: exon6 (3UTR)
Flanking Genome Sequence: GT24613 - 3-prime edge
```
TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTCACTA CAACTTTCAA 
GGACGGTTAA AAAAAAAGCT TATAACGACA AGTCACTGAG GTTCGATATG 
CCACAAACGA ACGGAAGCGT CTTCTCCGGA ACTTGCTACG GTGCAATCAT 
CAATGAAGGC GACTGCGTTC ACTCCACCGA GATGAGCGTT TCTTGCGGTT 
ATGCGACTTG AAGCTGGCTT GTCCACTTCA TATACAATGA CGCAAGTGTC 
TATGGACCCT GTGGCTACCA TCTTCATCTC ACTCGA
```

5 prime edge [+] show sequence

Not mapped

TTTTTCCTTT AAAAAAAAAA AAAGGGAATT TTTTTTTTTT TAAAAATTTT 
TTCCCCCCTT TTCGGGTTTT TCCCCTTTTT TGAACCTTCC CCCCTTTTCC 
GGGGGGGTTT TTTTGAAAAT TTTTTAAAAA TTTCATCCCC CCCAAAAAAA

AT2G01320.1

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.2

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.3

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01320.4

Model type: Protein coding
Short Description: ABC-2 type transporter family protein
Computational Description: ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.1

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR