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Mutant Lines
GT24618

GT24618

CSHL Arabidopsis genetrap mutant lines

Original: GT24618

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24618

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2931054 [Map]; Strand: c
- AT3G09540.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT3G09550.1 - [+] show detail - Ankyrin repeat family protein
  Distance: -811; Region: promoter

TTACCGACCG TTACCGACCG TTTTCATCCC TAGCTGGAGC GGCTGTATAT 
GGTGGTGGGA AAGGTGAATT GGGAGCTTCG CCGGGAAAAT TAGAACCGCC 
GTGATGGGAT CTGTGAATGC CATGTAAGTT TCCCATATCT AATTTATATA 
ACAAATGTTG AATTCAATTT CGGACAGTTT CAGTTTTTGT ATTTTTGGGA 
TATAATTGCT CTTTGTTTCA ACTGATGGTA GCTTTGTTGG AACTGTCCCA 
GAATATTGTT CTTTTTTTTG TCGGGAAAAA AAAAACTTTT TCCTTTTTTT 
TTTTTGCCCA ACCAAATCTT TTTTTTTTTT TTTAAAAAAA AGGGTGGAAA 
ATGTTTGTTT TTTTTTTAAA AAAATTTTAA ATTTAAAAAA TTTTCCCAGG 
GCAAAAATTT TTAATTTTTA AAAAACCCCT TTTTATTTTA AATTTACTTT 
TTCCTCCCCC CCC

AT3G09540.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Computational Description: Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G55140.1); Has 1920 Blast hits to 1910 proteins in 308 species: Archae - 2; Bacteria - 1025; Metazoa - 0; Fungi - 186; Plants - 681; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09550.1

Model type: Protein coding
Short Description: Ankyrin repeat family protein
Computational Description: Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink).
Link: InterPro Scan - TAIR